Streptomyces nojiriensis: JYK04_00539
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Entry
JYK04_00539 CDS
T07326
Symbol
rbn
Name
(GenBank) Ribonuclease BN
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snf03016
]
JYK04_00539 (rbn)
Enzymes [BR:
snf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JYK04_00539 (rbn)
Transfer RNA biogenesis [BR:
snf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JYK04_00539 (rbn)
Prokaryotic type
JYK04_00539 (rbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QTI42780
LinkDB
All DBs
Position
complement(547465..548424)
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AA seq
319 aa
AA seq
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MTPAPARTPAHPERLERGHPFRQWKTWRIPGTEFTLTGYSRANDKTFFHIPELRCALDAG
LVEGRQPETVFLTHTHHDHSKDLDHLAARPDGVDIHLPAAAVPYAEAFLRASAELNHGSA
YDPALAAGCRLHGVCGGDEFTFGRRGHHVRVVECVHKVPCVGYAFAERRKALLPEYEELR
RALAEQGRGAEFGRILAQRRKAGAEVEREVRRPLFAFLGDTHVSVFEDNPWLFEYPVVIT
ECTYLDDAELERADRVGHTVWSRLKPVVEAHPDTLFVLTHFSLRHSDQDVLDFFRDERPD
NVLLWAHPDSLLPEQHQHG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggcacctgcgcggacccccgcccaccccgaacggctggagcggggacacccg
ttccgccagtggaagacctggcgcatacccggcaccgagttcaccctcaccgggtactcg
cgcgccaacgacaagacgttcttccacatccccgaactgcgctgcgcgctcgacgccgga
ctggtggaagggcgtcagccggaaaccgtcttcctcacgcacacccaccacgaccactcc
aaggacctcgatcacctcgcggccaggccggacggggtcgacatccacctgcccgcggcg
gcggtgccgtacgcggaggcctttctgcgggcctccgccgaactgaaccacggcagcgcc
tacgatccggccctcgccgcgggctgccggctccacggggtgtgcggcggcgacgagttc
accttcgggcgccgcggccaccacgtacgggtggtggagtgcgtgcacaaggtgccctgc
gtgggttacgcgttcgccgaacgccgcaaggccctgctgcccgagtacgaggaactgcgc
cgcgccctcgccgaacagggccggggagcggagttcggccgcatcctggcgcagcgccgc
aaggcgggcgccgaggtcgaacgcgaggtgcgcaggccgctgttcgccttcctcggcgac
acccacgtcagcgtcttcgaggacaacccctggctcttcgagtacccggtggtcatcacc
gagtgcacgtatctcgacgacgccgagctggagcgggccgaccgggtcggacacaccgtc
tggagccggctgaagcccgtcgtcgaggcccacccggacaccctcttcgtcctcacccac
ttcagcctgcgtcactcggaccaggacgtcctggacttcttccgcgacgagcggcccgac
aacgtactgctgtgggcgcacccggacagcctgctgcccgagcagcaccagcacggctga
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