Streptomyces nojiriensis: JYK04_00584
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Entry
JYK04_00584 CDS
T07326
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_00584 (sigF_1)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_00584 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
KORA
MarR_2
HTH_28
HTH_23
DUF8073_C
HTH_Tnp_ISL3
DUF7343
HTH_37
HTH_3
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QTI42824
LinkDB
All DBs
Position
595048..595974
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AA seq
308 aa
AA seq
DB search
MSRSATVAGPIRATDAHLTPAVPGAVGAPRQDVELPEVKNAREMAPADARELSKLFFLRL
GALEEGTREYQYARNTLIEMNLSLVQFAARRFRSRVLGGGLDMDDIIQVGTIGLIKAIDR
YEPEREVEFSTLALPYITGEIKRYFRDTTWAVHVPRRLQERRTELARAQEALTEVLGRSP
TVKEVAQHLELTEEQVVEGLVAANGYTSGSLDTCAEGDEPSTATSRTTRPLADRLGEVDP
AMELFEEFHTLAPLLADLDERDRLILRMRFGEDRTQAEIGAELGISQMQVSRLLSRTLAQ
LRAGMLSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctcggccaccgtcgcaggccccattcgtgcaacagacgcgcacctgacgccc
gctgtgcccggcgccgtgggagccccacggcaggacgtggaactgcccgaggtgaagaac
gcccgggagatggcgcctgccgatgcgcgcgagctgtcgaaactcttcttcctgcggctc
ggcgccctggaagagggcacgcgtgagtaccagtacgcccggaacaccctgatcgagatg
aacctgtcgctggttcagttcgctgcgcggcgcttccggtcccgcgtgctgggcgggggg
ctggacatggacgacatcatccaggtggggaccatcggcctcatcaaggccatcgaccgc
tacgagcccgaacgcgaggtcgagttctccaccctcgccctcccctacatcaccggtgag
atcaagcgctacttccgtgacaccacctgggcggtgcacgtcccgcgccgtctgcaggaa
cggcgtacggagctcgccagggcccaggaggccctgaccgaggtactgggccggtcgccc
acggtcaaggaggtcgcccagcacctcgaactgaccgaggaacaggtcgtcgaagggctg
gtcgccgcgaacggctatacgagcggctccctggacacctgcgccgagggcgacgagccg
tcgacggcgacgagccgcacgacacgtccgctggcggaccggctcggtgaggtggatccc
gccatggagctcttcgaggagttccacaccctcgctcccctgctggcggatttggacgaa
cgcgaccggctgatcctgcggatgcgcttcggcgaggacaggacgcaggcggagatcggc
gcggaactgggcatctcgcagatgcaggtctcgcgcctgctgtcccggaccctggcccag
ctgcgcgccggaatgctctcggtgtag
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