Streptomyces nojiriensis: JYK04_00622
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Entry
JYK04_00622 CDS
T07326
Symbol
sigF_2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_00622 (sigF_2)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_00622 (sigF_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
MarR_2
DUF7343
HTH_Crp_2
HTH_3
Fimbrillin_C
Motif
Other DBs
NCBI-ProteinID:
QTI42861
LinkDB
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Position
complement(630162..631088)
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AA seq
308 aa
AA seq
DB search
MTFTATAEAMTPTTIPTTATPGGGTGEAPALGGLPDVPCPRELSTRDARELTRVFFERLQ
SLEEGTREYQYVRNTLIEMNISLVQFAARPFRDRPGGPENEDIVQVGIIGLIKAIDRYDP
ERNTQLTTLALPYITGEIKRHFRDTTWAVRVPRRFQELRLELAKATEELTAETDHAPTPA
ELAERLDLTEDEVRQGLVAANAYSTQSLDVPQDGATGGTQASAAARSTRSLAETMGEIDP
ALEAVEDRHALAPLLADLDERSTQILELRFGQEMTQAEIGAEIGLSQMQVSRLLTRTLGS
LREELLHT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcacggccacggccgaggccatgaccccgacgacgatcccgacgacggccacc
cccggcggtggcaccggcgaagcccccgcactcggcgggctcccggacgtgccctgccca
cgggaactgtcgacccgcgacgcccgggagctgacccgcgtcttcttcgaacggctgcag
agcctcgaagagggcacccgcgagtaccagtacgtgcgcaacacgctgatcgagatgaac
atctcactggtgcagttcgccgcccgcccgttccgcgaccgccccggcggccccgagaac
gaggacatcgtccaggtgggcatcatcggactgatcaaggcgatcgaccgctacgacccc
gagcgcaacacacagctcaccaccctcgccctgccctacatcacgggcgagatcaagcgc
cacttccgggacaccacctgggccgtacgggtgccgcgccgcttccaggagctgcgcctg
gagctcgcgaaggccacggaggagctgaccgccgagacggaccacgcgcccacccccgcg
gagctcgccgagcggctggacctcaccgaggacgaggtccgccagggcctggtcgcggcc
aacgcctactccacgcagtccctcgacgtaccccaggacggcgccaccggcggcacccag
gcgtccgccgccgcacggagcacgcgcagcctcgccgagaccatgggcgagatcgacccc
gccctggaggcggtcgaggaccggcacgccctcgcgcccctgctcgccgacctggacgag
cgctccacccagatcctggagctgcgcttcggccaggagatgacccaggcggagatcggc
gcggagatcggcctctcccagatgcaggtctcccgcctgctcacccgcacgctgggctcc
ctgcgcgaggaactgctgcacacctga
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