Streptomyces nojiriensis: JYK04_00631
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Entry
JYK04_00631 CDS
T07326
Symbol
sigF_3
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_00631 (sigF_3)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_00631 (sigF_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
MarR_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
HTH_37
DUF7343
KORA
Sigma70_ECF
HTH_31
MarR
GerE
Motif
Other DBs
NCBI-ProteinID:
QTI42870
LinkDB
All DBs
Position
639232..640095
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AA seq
287 aa
AA seq
DB search
MPATLRSQTGSEPQETREIRDPRSVSTADAHDLSVTLFRRLHELDEGTAAYSYVRNTLVE
LNLSLVKYAATRVRHVGAPWEDVLQVGTIGLIKAINRFDPERGFEFMSFALPTIVGEIKR
YFRDTTWAVRVPRRLQELRIDLAKANDALEQELGHAPGTRELAERLDITLEEVREGRLAA
NGFTSLSLDVPVTAEEDEAPGVSSRSLGIEESRFETVEDLESLRPLVGELSERDRTILAL
RFGEELTQAEIGERLGMSQMHVSRLLSRILARLREGLLAEEPPAETA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccactctccgtagccagaccggctccgagccgcaggagacccgcgagattcgc
gatccgcggtccgtgagcaccgctgacgcccacgacctgtcggtgacgctcttccggcgg
ctgcacgaactggacgaggggaccgcggcgtactcgtacgtgcgcaacaccctggtcgag
ctgaatctgagcctggtcaagtacgcggccacgcgcgtccgtcacgtcggcgcgccgtgg
gaagacgtcctgcaggtcggcaccatcggcctgatcaaggccatcaacaggttcgacccg
gagcgcgggttcgagttcatgtcgttcgccctgcccaccatcgtgggagagatcaagcgg
tacttccgtgacacgacctgggccgtccgcgtcccgcgccggctgcaggagctgcgcatc
gacctggccaaggcgaacgacgccctggagcaggagctgggccacgcgccgggtacgcgg
gagctcgccgaacggctggacatcaccctggaggaggtccgcgagggccggctcgcggcc
aacggcttcaccagcctgtccctcgacgtacccgtgacggcggaggaggacgaggcacct
ggcgtgtcctcccggagcctcggcatcgaggagagccgcttcgagacggtcgaggacctg
gaatcgctgaggccgctggtgggagagctgtccgaacgggaccggacgatattggccctg
cgtttcggggaggaactgacgcaggccgagatcggcgaacgcctgggcatgtcgcagatg
cacgtctcccggctgctgagccgcatcctggcccggctgcgggagggactgctcgccgag
gaaccgccggccgagacggcatga
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