Streptomyces nojiriensis: JYK04_00809
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Entry
JYK04_00809 CDS
T07326
Symbol
sigJ_1
Name
(GenBank) ECF RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_00809 (sigJ_1)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_00809 (sigJ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
DUF4440
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
QTI43047
LinkDB
All DBs
Position
820171..821064
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AA seq
297 aa
AA seq
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MSEKEVLARRFEEHRSHLRAVAYRMLGSLSEAEDAVQEAWLKLNRSDATAVENLGGWLTT
VVGRVCLDMLRSRGTRREDPLHDQDGQVRLPDPIVSRADGLDPEQEILLADSVGIALMVV
LDTLAPAERLAFVLHDLFAVPFDEIAPVLGRSAATTRQLASRARRRVQGAAPAPDPDRAR
LRAIVDAFLTASRGGDFDALVAVLDPDVVARSDGGTLRPSLLRRGAAEVASQAIAFARFA
EAARAALVNGVPGVVAMAEGRPLSVMAFTIRDGRITALDILTDPERLARIDPSVLDG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaaggaagttctggcacggcgcttcgaagagcaccgctcccacctgcgggcg
gtggcctaccggatgctgggctcgctcagcgaggcggaggacgccgtacaggaggcctgg
ctgaagctgaaccgctccgacgcaacggcggtggagaacctgggcggctggctgaccacc
gtcgtcggccgggtgtgtctggacatgctgcgctcgcgcggcacccggcgcgaggatccg
ctgcacgatcaggacgggcaggtccgcctgcccgacccgatcgtcagccgcgcggacggg
ctcgaccccgagcaggagatcctgctggccgactcggtcggcatcgcactgatggtcgtc
ctggacaccctggctcccgccgagcgcctggccttcgtcctgcacgacctgttcgccgtg
cccttcgacgagatcgcccccgtactcgggcgttccgccgccacgacccggcagctcgcg
agccgggcccgccgccgcgtccagggcgcggcgcccgcgccggaccccgaccgggcccgg
ctgcgcgcgatcgtcgacgccttcctcaccgcctcgcgcggcggggacttcgacgccctc
gtcgcggtcctcgaccccgatgtggtggcccgctccgacggcggcacattgcgcccgtcg
ctgctccggcgcggcgcggccgaggtcgcctcccaggcgatcgccttcgcccggttcgcc
gaggccgcccgcgcggcactggtcaacggggtccccggggtcgtcgcgatggcggaaggc
cggccgctgtcggtcatggcgttcaccatccgggacggcaggatcaccgcgctcgacatc
ctgaccgaccccgagcgtctggcgcgcatcgacccgagcgtcctcgacggctga
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