Streptomyces nojiriensis: JYK04_00824
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Entry
JYK04_00824 CDS
T07326
Symbol
sigF_4
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_00824 (sigF_4)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_00824 (sigF_4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
KORA
HTH_23
HTH_28
MarR_2
HTH_Crp_2
HTH_3
GerE
Motif
Other DBs
NCBI-ProteinID:
QTI43062
LinkDB
All DBs
Position
836539..837462
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AA seq
307 aa
AA seq
DB search
MSRSTTMMGPVRAKEAQTTGTPGTPGTPAEDRKPVRVENAREMAPRDARELSRVFFRRLR
TLEEGTREYQYTRNTLIEMNLSLVQFAARRFRARVLGGGLDMDDIIQVGTIGLIKAIDRY
ELEREVEFSTLALPYIIGEIKRHFRDTTWAVHVPRRLQELRSELAKAQEALTDVLGRAPT
VKEVAGHLELTEEQVIDGLIAANGYTSGSLDTAAGESDVPSPTNRTTRPLAELVGDVDPA
MELFEDFHTLAPLLQQLDERDRLILRMRFGQEKTQAEIGAALGISQMQVSRLLSRTLVRL
RAGMLAG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctcgaccaccatgatgggccccgttcgggcaaaagaagcacaaaccacaggt
accccgggaaccccgggaaccccggcggaggaccggaaaccggttcgagtggagaacgcc
cgtgagatggcaccccgcgacgcacgcgagctctcgcgtgtcttcttccgcagactgcga
acgctggaggagggcacgcgcgagtaccagtacacgcgcaacaccctgatcgagatgaac
ctctccctcgtgcagttcgccgcacggcgattccgcgcccgcgtgctcggcggaggcctg
gacatggacgacatcatccaggtggggaccatcgggctcatcaaggcgatcgaccgctac
gaactcgagcgcgaggtcgagttctccactcttgccctcccctacatcatcggggagatc
aagcgccacttccgcgacaccacctgggccgttcacgttccccgccgtctccaggaactg
cggagcgagctcgccaaggcccaggaggccctgacggacgtcctcggccgggccccgacc
gtcaaggaggtcgccggccacctcgaactgaccgaggaacaggtcatcgacggactcatc
gcagcgaacggctatacgagcggctccctcgacaccgccgccggggagagcgacgtaccg
tccccgaccaaccggaccacccggccgctggcggaactcgtcggtgacgtcgaccccgcc
atggaactcttcgaggacttccacaccctcgcaccgctactgcaacagctggacgagcgc
gaccggctcatcctgcggatgcgcttcggccaggagaagacccaggccgagatcggcgcc
gcactgggcatctcccagatgcaggtctcccgcctcctgtcccgcactctcgtccggctt
cgcgctggcatgctcgccgggtag
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