Streptomyces nojiriensis: JYK04_01156
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Entry
JYK04_01156 CDS
T07326
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
snf
Streptomyces nojiriensis
Pathway
snf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYK04_01156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snf02000
]
JYK04_01156
Transporters [BR:
snf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JYK04_01156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QTI43394
LinkDB
All DBs
Position
complement(1172485..1173645)
Genome browser
AA seq
386 aa
AA seq
DB search
MLSSSARRGAAVLLSAAVLTTLSACGAAPDQKSGGADGAKSVQPGAATSVADFGSLEALA
AAAQKEGELNVIALPPDWANYGEIIKAFEAKYKIKVNGENPDASSSDEIAAVKSRKGQKR
APDVLDLGIAFARSGAAENLFAPYKVTGWDKIPAAQKDADGRWTNDYGGYVSIGCDAARI
PTCPQTFADLLKPEYKGKVALNGNPTKSGSAFGGVYAAALANKGSFADIQPGIDFFGQLK
KSGNFIPVESTPATVEKGETPISIDWDYLNAGYADQFKGKGVDWKVAVPTDGVYAQYYSQ
AVNKEAPNPAAARLWLEFLYSAEGQNLWLKGYARPVLLPGMTQDGTADQAAVAKLPQVQG
TPAFPASEELDKAKATLAEKWDKALS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagttcctccgcccgtcgcggtgcggccgttctgctcagcgccgccgtactcacc
acgctcagcgcctgcggtgccgcccccgaccagaagtccggcggcgccgacggcgccaag
agcgtgcagccgggcgccgcgacctcggtcgccgacttcggctccttggaggccctcgcc
gccgccgcgcagaaggagggcgagctcaacgtgatcgcgctgccgccggactgggcgaac
tacggcgagatcatcaaggccttcgaggccaagtacaagatcaaggtgaacggcgagaac
ccggacgcctccagctccgacgagatcgccgccgtcaagtcccgcaagggccagaagcgc
gcccccgacgtcctggacctcggcatcgccttcgcccgcagcggcgcggccgagaacctc
ttcgccccgtacaaggtcaccggctgggacaagatccccgccgcccagaaggacgccgac
ggccgctggaccaacgactacggcggctacgtctccatcggctgcgacgccgcccgcatc
cccacctgcccgcagaccttcgccgatctgctcaagcccgagtacaagggcaaggtcgcc
ctcaacggcaaccccaccaagtccggctcggccttcggcggcgtctacgcggccgccctc
gccaacaagggctccttcgccgacatccagcccggcatcgacttcttcggccagctgaag
aagagcgggaacttcatcccggtcgagtccaccccggccaccgtggagaagggcgagacg
cccatctccatcgactgggactacctgaacgccggctacgccgaccagttcaagggcaag
ggcgtcgactggaaggtcgccgtccccaccgacggcgtctacgcccagtactactcgcag
gccgtcaacaaggaggccccgaacccggcggccgcccgcctgtggctggagttcctctac
agcgccgagggccagaacctgtggctcaagggatacgcccgcccggtcctgctccccggc
atgacccaggacggcaccgccgaccaggccgccgtcgccaagctcccgcaggtgcagggc
accccggccttccccgcctccgaggagctcgacaaggccaaggccaccctcgccgagaag
tgggacaaggccctctcctga
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