Streptomyces nojiriensis: JYK04_01408
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Entry
JYK04_01408 CDS
T07326
Symbol
lysA_2
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00300
Lysine biosynthesis
snf00470
D-Amino acid metabolism
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01230
Biosynthesis of amino acids
Module
snf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYK04_01408 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYK04_01408 (lysA_2)
Enzymes [BR:
snf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JYK04_01408 (lysA_2)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QTI43646
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Position
1443419..1444753
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AA seq
444 aa
AA seq
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MTTAVLSEVATGTDDLSIWPASTQRLPHGGLAVGGVSLAEVAERFETPVYVLDEGEVRGR
CRTYRDAFPDADVHYAAKAFLSRAMVRWVQEEGLGLDVCSAGELELAVTAGFPPERIVLH
GNAKSPRDLAAALRLGVGRIVIDGPSEIARIAAAIGPEGHQKVMVRVVPGVSAGGHDKIR
TGTDDQKFGLSLTDGGAQHAIARILSQPQLELTGLHCHIGSQITDGKPYLVALRRMVGLM
ARIRDTHGIVLPELDMGGGHGIAYRPGEPALDLTTLARRLRAELVEGCAAARLTVPRLLI
EPGRAVVGPAGVALYRVLAVKHTGEKVFVAVDGGMSDNPRPALYGVRYAPRLIGRQSTAG
ARTATVVGRHCEAGDILAADVELPGDIHPGDLLAVPVAGAYQLSMASGYNLVGRPAVIAV
HEGSARTLVRRETLEDFRSRDIGG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccgtactctccgaggtcgccaccggcaccgacgacctgtccatatggcca
gcgtccacgcagcggctcccgcacggcggcctggccgtcggcggcgtgtcgctcgccgag
gtcgccgagcggttcgagaccccggtctacgtcctggacgagggcgaggtgcgcgggcgc
tgccggacctaccgggacgccttccccgacgccgatgtccactacgccgcgaaggccttc
ctctcccgcgcgatggtgcgctgggtgcaggaggaagggctgggcctggacgtctgctcc
gccggggagctggagctcgccgtcaccgccgggttcccgcccgagcggatcgtgctgcac
ggcaacgccaagtcgccccgcgacctggcggcggcgctgcggctcggcgtcgggcggatc
gtcatcgacggtccctccgagatcgcccgcatcgcggccgccatcggccccgaggggcac
cagaaggtcatggtgcgggtggtcccgggcgtctcggccggcggccacgacaagatccgc
accggtacggacgaccagaagttcggcctgtccctcaccgacgggggcgcgcaacacgcc
atcgcccggatcctgagccagccgcagctcgaactgaccggcctgcactgccacatcggc
tcccagatcaccgacgggaagccctacctggtggccctgcgccgcatggtcgggttgatg
gcccgcatccgtgacacgcacggcatcgtcctgcccgagctggacatgggcggcggccac
ggcatcgcctaccggcccggcgaacccgccctcgacctcaccacgctggcgcgtcggctg
cgcgccgagctcgtcgaaggctgcgccgccgcccggctgaccgtccccaggctcctcatc
gagcccggacgagccgtcgtcgggcccgccggagtggccttgtaccgggtgctcgccgtc
aagcacaccggcgagaaggtgttcgtcgccgtcgacggcggcatgagcgacaacccccgc
cccgccctgtacggggtgcgctacgcgccccgcctgatcggccggcagtccactgccggt
gcccgcacggccacggtcgtcggccggcactgcgaggccggcgacatcctcgccgccgac
gtggaactgccgggcgacatccaccccggagacctgctggccgtaccggtggccggcgcc
taccagctgtccatggcctccgggtacaacctcgtcggacggcccgcggtcatcgcggtc
cacgagggctcggcccggaccctggtccggcgcgagacgttggaggacttccgcagccgg
gacatcggcgggtag
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