Streptomyces nojiriensis: JYK04_01522
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Entry
JYK04_01522 CDS
T07326
Symbol
ung_1
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JYK04_01522 (ung_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_01522 (ung_1)
Enzymes [BR:
snf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JYK04_01522 (ung_1)
DNA repair and recombination proteins [BR:
snf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JYK04_01522 (ung_1)
Prokaryotic type
JYK04_01522 (ung_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTI43759
LinkDB
All DBs
Position
1566594..1567280
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AA seq
228 aa
AA seq
DB search
MAARPLNEIVEPGWARALEPVAGQIAAMGDFLRAEIAAGRTYVPAGANVLRAFQQPFDEV
KVLIVGQDPYPTPGHAVGLSFSVAPDVRPVPPSLDNIFLEMHRDIGTGRPANGDLTPWTR
QGVLLLNRSLTTAPRRSNAHQGKGWEAVTDQAIRALAARGKPLVSILWGRAARNLRPLLG
ELPVVESSHPSPKSADYGFFGSRPFSRTNELLVGQGSQPVDWRLPSVS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaacgaaatcgtagagccgggctgggcccgggctctggagccg
gtggcggggcagatcgccgccatgggcgacttcctgcgcgccgagatcgcggcggggagg
acgtacgtaccggccggggccaatgtgctgcgtgccttccaacagcccttcgacgaggtc
aaggtgctgatcgtggggcaggatccctatcccacgccgggacacgcggtgggcctgtcc
ttctcggtcgccccggacgtgcggccggtaccgccgagcctcgacaacatcttcctggag
atgcaccgggacatcggcaccggccgcccggcgaacggcgacctcaccccgtggacccgg
cagggcgtcctgctgctcaacaggtcgctcacgaccgcgccccggcgctccaacgcgcac
cagggcaagggctgggaagccgtcaccgaccaggccatccgggccctggccgcgcgcggc
aagccgctggtctccatcctctggggacgggcggcccgcaacctgcggccgctgctcggc
gaactgcccgtcgtggagtcctcgcacccctcccccaagtcggccgactacgggttcttc
ggctcccgtccgttcagccggacgaacgagctgctggtgggccagggttcacagcctgtg
gactggcgcttgccgtccgtcagttga
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