Streptomyces nojiriensis: JYK04_01942
Help
Entry
JYK04_01942 CDS
T07326
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_01942 (sbcD)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYK04_01942 (sbcD)
Archaeal homologous recombinant proteins
JYK04_01942 (sbcD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QTI44179
LinkDB
All DBs
Position
complement(2060386..2061555)
Genome browser
AA seq
389 aa
AA seq
DB search
MKFLHTSDWHLGRAFHRVNLLGAQAVFIDHLVETVREREVDAVLVAGDIYDRAVPPLPAV
ELYDRALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTDPASCADPVVLADV
HGDVALYGLPYLEPALVKDQFGAEKVSHEAVLGAAMDRIRADLATRAPGTRSIVLAHAFV
TGGQASDSERDITVGGVEAVPASVFDGVDYAALGHLHGSQTIGERVRYSGSPLAYSFSEA
DHRKTMWLVELGAQGEIAGAERIDTPVPRTLARLRGRLEDLLQDPAHQVHEDAWVEATLT
DPVRPDDPMARLAARFPHTLTLAFDPEGRREETGASYAQRLKGRSDQEIAEDFVAHVRGG
GHADEAERAVLQGAFDDVRADDSHRETHR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcctgcacacctccgactggcacctcggccgggccttccaccgggtcaacctg
ctcggcgcccaggcggtcttcatcgaccacctcgtcgagaccgtgcgcgagcgcgaggtc
gacgccgtcctcgtcgccggcgacatctacgaccgggccgtgcccccgctgcccgccgtg
gaactgtacgaccgggccctgcaccgcctcgccgacctcggcgtgcccaccgtgatgatc
tccggcaaccacgactccgcgcgccgcctcggcgtcggcgccgggctgatcggccgggcc
gggatccacctgcggaccgacccggccagctgcgccgaccccgtcgtcctggccgacgta
cacggtgacgtggcgctgtacggcctgccgtacctggagcccgccctggtcaaggaccag
ttcggcgcggagaaggtcagccacgaggcggtcctcggtgccgccatggaccggatccgg
gccgacctggccacccgcgcgcccggcacccgttcgatcgtcctcgcgcacgccttcgtc
accggcggacaggccagcgacagcgagcgcgacatcaccgtcggaggggtcgaggccgtg
cccgcctccgtcttcgacggcgtggactacgccgccctgggccacctccacggcagccag
acgatcggcgaacgggtccgctactccggttccccgctcgcctactccttctccgaggcc
gaccaccgcaagaccatgtggctggtcgaactcggcgcgcagggcgagatcgccggcgcc
gagaggatcgacacccccgtcccgcgcaccctcgcccggctccgcggacggctggaggac
ctgctccaggatccggcgcaccaggtccacgaggacgcctgggtcgaggccaccctcacc
gacccggtccgccccgacgaccccatggcccgcctcgcggcccgcttcccgcacaccctc
accctcgccttcgaccccgaaggccgccgggaggagaccggcgcctcctatgcccagcgg
ctcaagggccgcagcgaccaggagatcgccgaggacttcgtcgcccacgtgcgcggcggc
ggtcacgcggacgaggccgaacgggccgtcctccagggcgccttcgacgacgtacgggcc
gacgacagccaccgggagacccaccgatga
DBGET
integrated database retrieval system
