Streptomyces nojiriensis: JYK04_02140
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Entry
JYK04_02140 CDS
T07326
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00220
Arginine biosynthesis
snf00240
Pyrimidine metabolism
snf00250
Alanine, aspartate and glutamate metabolism
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01240
Biosynthesis of cofactors
Module
snf_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JYK04_02140 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JYK04_02140 (carB)
00220 Arginine biosynthesis
JYK04_02140 (carB)
Enzymes [BR:
snf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JYK04_02140 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QTI44372
LinkDB
All DBs
Position
complement(2269558..2272866)
Genome browser
AA seq
1102 aa
AA seq
DB search
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRILKAEGLRVILVNSNPATIMTDPEI
ADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISMHEQGVLEKYGVELIGANV
EAINKGEDRDLFKGVVEAVKAKIGYGESARSVICHSMDDVIKGVDTLGGYPVVVRPSFTM
GGAGSGFAHDEDELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDTKDNVVVVCSI
ENFDPMGVHTGDSITVAPAMTLTDREYQRLRDIGIAIIREVGVDTGGCNIQFAIDPTDGR
VIVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEVPNDITEKTPASFEPSLDYV
VVKAPRFAFEKFPLADATLTTTMKSVGEAMAIGRNFTEALQKALRSLEKKGSQFTFVGPT
GDKEELLRTAVRPTDGRINTVMQAIRAGATQEEVFEFTKIDPWFVDQLFLIKEIADELTA
AEKLGPELLAEAKRHGFSDAQIAEIRGLREDVVREVRHALGVRPVYKTVDTCAAEFAAKT
PYFYSSYDEESEVATRTKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVHAESLAGPIAGVVVQLGGQTPLGLAQALKDN
GVPVVGTPPEAIHAAEDRGAFGQVLADAGLPAPKHGTATTFAGAKAIADEIGYPVLVRPS
YVLGGRGMEIVYDEARLESYIAESTEISPTRPVLVDRFLDDAIEIDVDALYDGHELYLGG
VMEHIEEAGIHSGDSACALPPITLGGYDIKRLRASTEAIAKGVGVRGLINIQFAMAGDIL
YVLEANPRASRTVPFTSKATAVPLAKAAARISLGTTIAELRAEGLLPKTGDGGTLPIDAP
ISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTGEVMGIDAVFGTAYAKSQAGAYGPLPTK
GRAFISVANRDKRSMIFPARELVAHGFELMATSGTAEVLRRNGINATVVRKLSEGEGPNG
EKTIVQLIHDGQVDLIVNTPYGTGGRLDGYEIRTAAVARSVPCLTTVQALAAAVQGIDAL
NRGDVGVRSLQEHAEHLTAARD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcgcaccgatatccagtccgtcctggtcatcggctccggcccgatcgtcatc
ggacaggccgccgagttcgactactccggcacccaggcctgccgcatcctcaaggccgag
ggcctgcgggtcatcctggtgaactccaaccccgcgacgatcatgaccgacccggagatc
gccgacgccacgtacgtcgagccgatcacccccgagttcgtcgagaagatcatcgccaag
gagcgtcccgacgctctcctgccgaccctcggcggccagaccgcgctcaacaccgcgatc
tccatgcacgagcagggtgtgctggagaagtacggcgtcgagctcatcggcgccaacgtc
gaagccatcaacaagggcgaggaccgcgacctcttcaagggcgtcgtcgaggccgtcaag
gccaagatcggatacggcgagtccgcccgctcggtcatctgccactcgatggacgacgtc
atcaagggcgtcgacaccctcggcggctaccccgtcgtcgtccgcccctccttcaccatg
ggcggcgccggctccggcttcgcccacgacgaggacgagctgcgccgcatcgccggccag
ggcctcacgctctccccgaccaccgaggtgctcctggaggagtccatcctcggctggaag
gagtacgagctggagctgatgcgcgacaccaaggacaacgtggtcgtcgtctgctccatc
gagaacttcgacccgatgggcgtccacaccggtgactcgatcaccgtcgccccggccatg
accctgaccgaccgcgagtaccagcggctgcgcgacatcggcatcgcgatcatccgcgag
gtcggcgtcgacaccggcggctgcaacatccagttcgcgatcgacccgaccgacggccgc
gtcatcgtcatcgagatgaacccgcgcgtctcccgctcctcggcgctcgcgtcgaaggcc
accggcttcccgatcgccaagatcgccgccaagctggccatcggctacacgctcgacgag
gtccccaacgacatcaccgagaagaccccggcctccttcgagccgtccctcgactacgtc
gtcgtcaaggccccgcgcttcgccttcgagaagttcccgctggccgacgccaccctcacc
accaccatgaagtcggtcggcgaggccatggccatcggccgcaacttcacggaggccctc
cagaaggccctgcgctccctggagaagaagggctcgcagttcaccttcgtcggccccacc
ggcgacaaggaagagctgctgcgcaccgcggtccgcccgaccgacggccgcatcaacacc
gtcatgcaggccatccgcgccggcgccacccaggaggaggtcttcgagttcacgaagatc
gacccctggttcgtcgaccagctcttcctcatcaaggagatcgcggacgagctgaccgcc
gccgagaagctcggccccgagctgctcgccgaggccaagcgccacggcttctccgacgcc
cagatcgccgagatccgcggtctgcgcgaggacgtcgtccgcgaggtccgccacgccctc
ggcgtccgcccggtctacaagacggtcgacacctgcgccgccgagttcgccgcgaagacc
ccgtacttctactcctcgtacgacgaggagtccgaggtcgcgacccgcaccaagcccgcg
gtgatcatcctgggctccggcccgaaccgcatcggccagggcatcgagttcgactactcc
tgcgtccacgcctccttcgccctcagcgacgccggctacgagaccgtgatggtcaactgc
aacccggagaccgtctccaccgactacgacacctccgaccgcctgtacttcgagccgctg
acgctcgaggacgtgctggagatcgtccacgccgagtcgctggccggccccatcgccggt
gtcgtcgtccagctcggcggccagacccccctcggtctcgcccaggccctcaaggacaac
ggcgtcccggtcgtcggcaccccgccggaggccatccacgccgccgaggaccgcggcgcc
ttcggccaggtcctcgccgacgccggcctgccggcccccaagcacggcaccgccaccacc
ttcgcgggtgcgaaggcgatcgccgacgagatcggctacccggtcctggtccgcccgtcc
tacgtgctcggcggccgcggcatggagatcgtctacgacgaggcccgcctcgagtcgtac
atcgccgagtccaccgagatctccccgacccgccccgtgctggtcgaccggttcctcgac
gacgcgatcgagatcgacgtcgacgccctctacgacggccacgagctctacctcggcggc
gtcatggagcacatcgaggaagccggcatccactccggcgactcggcctgcgccctgccc
ccgatcaccctcggcggctacgacatcaagcgcctgcgcgcctccaccgaggcgatcgcc
aagggcgtcggcgtccgcggcctgatcaacatccagttcgccatggccggggacatcctc
tacgtcctcgaggccaacccgcgcgcctcccggaccgtccccttcacctcgaaggccacc
gcggtcccgctcgcgaaggccgccgcccgcatctcgctcggcaccaccatcgccgagctg
cgcgccgagggcctgctgccgaagaccggcgacggcggcaccctgccgatcgacgcgccg
atctccgtcaaggaggccgtcatgccgtggtcgcgcttccgcgacatccacggccgcggc
gtggacaccgtcctcggccccgagatgcgctccaccggcgaggtcatgggcatcgacgcc
gtcttcggcaccgcctacgccaagtcgcaggccggcgcctacggcccgctgcccaccaag
ggccgcgccttcatctccgtggccaaccgcgacaagcgctcgatgatcttcccggcgcgc
gagctcgtcgcccacggcttcgagctgatggccacctccggcaccgccgaggtgctgcgc
cgcaacggcatcaacgccaccgtggtgcgcaagctcagcgagggcgagggcccgaacggc
gagaagaccatcgtccagctgatccacgacggccaggtcgacctgatcgtcaacaccccg
tacggcaccggcggccgcctcgacggctacgagatccgtacggcggccgtggcccgcagc
gtcccctgcctgaccacggtccaggcgctcgccgccgccgtccagggcatcgacgcgctc
aaccgcggcgacgtgggcgtgcgctccctccaggagcacgcggagcacctgaccgcggcc
cgcgactga
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