Streptomyces nojiriensis: JYK04_02290
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Entry
JYK04_02290 CDS
T07326
Symbol
pafC
Name
(GenBank) Protein PafC
KO
K13573
proteasome accessory factor C
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
snf03051
]
JYK04_02290 (pafC)
Proteasome [BR:
snf03051
]
Prokaryotic proteasome
Bacterial regulatory particles
JYK04_02290 (pafC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WYL
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QTI44514
LinkDB
All DBs
Position
complement(2418172..2419140)
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AA seq
322 aa
AA seq
DB search
MAANAIDQTRRMLSLVTYLRERPGAHVADVARAFGITEDELISDLDVLPMCGTSFRGGDL
LDIDTDGERIWWRNPDASGESTAEPLRLAADEATALLVAARAVATLPGLRESDRDALLRA
TAKLEAAAGEVAGASSRLSVTFESEGGVFADVDRAIAERRRLWLRYYSPARDELTERTVD
PIRLFAVGHTYMEGWCHLSEARRTFRLDRVAEIRLLDERAEPPAIEPRDLSEGLVQPAAE
DPEVVVEVGPGGRWVAEYYPHDSAEELTGGGLRITLRSPDPASLRRLALRLGREGRIVAP
AELADSARSAAREALAGYGEQV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaacgccatcgaccagacccgccggatgctgtccctggtgacctacctgcgc
gagcgccccggtgcgcacgtcgcggacgtcgcgcgcgccttcgggatcacggaggacgag
ctgatctcggacctcgacgtgctgcccatgtgcgggaccagtttccggggcggggacctg
ctcgacatcgacaccgacggggagcgcatctggtggcgcaaccccgacgcctcgggggag
tccaccgccgagccgctgcggctggccgccgacgaggcgaccgcgctgctggtggccgcg
cgtgccgtggccaccctgcccgggctgcgcgagagcgaccgggacgccctgctgcgggcc
acggccaagctggaggcggccgcgggcgaggtggccggggccagctcccggctgtcggtg
accttcgagtccgagggcggggtcttcgcggacgtcgaccgggccatcgcggagcgccgg
cggctgtggctgcgctactactcgcccgcgcgggacgagctgaccgagcgcacggtcgac
ccgatccggctcttcgcggtggggcacacgtacatggagggctggtgccacctctccgag
gcgcggcgcaccttccgcctcgaccgggtcgcggagatccggctgctggacgagcgggcc
gagccgcccgccatcgagccgcgcgacctgtccgagggcctggtccagccggccgccgag
gacccggaggtcgtggtcgaggtggggccgggcgggcgctgggtcgccgagtactacccg
cacgacagcgcggaggagctgaccgggggcggtctgcggatcaccctgcgcagcccggac
ccggcctcgttgcgccggctggcgctgcggctgggccgtgagggccggatcgtcgctccg
gccgagctggcggacagcgcgcgcagcgccgcccgggaggcgctggcggggtacggggaa
caggtctga
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