Streptomyces nojiriensis: JYK04_02310
Help
Entry
JYK04_02310 CDS
T07326
Symbol
ddpA_3
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
snf
Streptomyces nojiriensis
Pathway
snf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYK04_02310 (ddpA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snf02000
]
JYK04_02310 (ddpA_3)
Transporters [BR:
snf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JYK04_02310 (ddpA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TBPIP
Motif
Other DBs
NCBI-ProteinID:
QTI44534
LinkDB
All DBs
Position
complement(2439071..2440675)
Genome browser
AA seq
534 aa
AA seq
DB search
MNRKTMVLTAAAGLLTPALAACGSASGGGAGSGAIVVGTTDRFEAADFAPAPFDPAYAYD
AGAWNVLRQTVQTLMHTPRGGGQPVPEAASACRFTDAGNESYRCTLRPGLKFADGEPLTA
KDVKFSIDRVLAIKDENGPSSLLSTLDNVEVKGADTVVFHLKTPDATFPFKLSTPAAGIV
SEKNYDAKKLREGFAVDGSGPYTMKAEVKGNRLVRAVFTKNPHYKGDLKLQNDKVELRTF
TDSPAMGKALTDGKIHMVSRTLSPAQITEFSAQPPKGVKLVPMPGLEIRYLGFNTEAPVV
KDKAVRQALAAAVDRGQLISKVYGKSAQPLYSLVPTTVTGHVNSFYNKYGEANTPKAAAL
LKEAGIKTPVKLTLHYTSDHYGDGTAAEFDALKAQLNSTGLFDITVQGSEWADFRPAQKK
GDHAAYGLGWFPDYPDADNFLAPFLEQDNFLGTPYANSAVRSRLIPESRRAVDRTIAVPA
ITEIQDIVAEDVPVLPLWQGKQYVAARDGITGVEWSVNAISDLQLWELGRGVSG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaccatggtgctgacggccgcggccggactgctcacccccgcgctggcc
gcatgcggcagcgcgagcggcggaggagcaggatccggagcgatcgtcgtcggaaccacc
gatcggttcgaggccgcagacttcgctcccgcccccttcgaccccgcctacgcctacgac
gccggcgcctggaacgtcctgcgccagaccgtccagacgctgatgcacaccccgcgcggc
ggcggccagcccgtccccgaagcagcctccgcctgccgcttcaccgacgccggcaacgag
agctaccgctgcaccctgcgccccggtctgaagttcgccgacggtgagcccctcaccgcc
aaggacgtcaagttctccatcgaccgcgtcctcgccatcaaggacgagaacggcccctcc
tcgctgctctccaccctcgacaacgtcgaggtcaagggcgccgacaccgtcgtcttccac
ctgaagaccccggacgcgaccttcccgttcaaactctccacccccgccgccggcatcgtc
agcgagaagaactacgacgccaagaagctccgcgagggcttcgccgtggacggctccggc
ccgtacacgatgaaggccgaggtcaagggcaaccggctggtccgcgccgtcttcaccaag
aacccgcactacaagggcgacctcaagctgcagaacgacaaggtcgagctgcgcaccttc
accgactccccggccatgggcaaggcactcacggacgggaagatccacatggtctcccgc
accctgtcgcccgcccagatcaccgagttcagcgcccagccgcccaagggcgtcaagctg
gtcccgatgcccggcctggagatccgctacctcggcttcaacaccgaggcaccggtcgtc
aaggacaaggccgtccgccaggcgctcgccgccgccgtcgaccgcggacagctcatctcc
aaggtctacggcaagtccgcccagccgctctactcgctggtccccaccaccgtgacgggc
cacgtcaactccttctacaacaagtacggcgaggccaacacgcccaaggccgccgccctg
ctgaaggaggccgggatcaagaccccggtcaagctgaccctgcactacaccagcgaccac
tacggcgacggcacggccgccgagttcgacgccctcaaggcccagctgaactccaccggg
ctcttcgacatcaccgtccagggcagcgagtgggcggacttccgccccgcccagaagaag
ggcgaccacgccgcctacgggctcggctggttccccgactacccggacgccgacaacttc
ctcgccccgttcctggagcaggacaacttcctgggcacgccgtacgccaacagcgcggtg
cgcagcaggctcatccccgaatcccggcgggcggtcgaccgtacgatcgccgtccccgcg
atcacggagatacaggacatcgtcgccgaggacgtgcccgtcctgcccctgtggcagggc
aagcagtacgtcgccgcacgcgacgggatcaccggagtggagtggtcggtcaacgccatc
tccgacctccagttgtgggagctcggtcgcggcgtaagcggctga
DBGET
integrated database retrieval system
