Streptomyces nojiriensis: JYK04_02432
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Entry
JYK04_02432 CDS
T07326
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snf03009
]
JYK04_02432
Enzymes [BR:
snf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
JYK04_02432
Ribosome biogenesis [BR:
snf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYK04_02432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QTI44655
LinkDB
All DBs
Position
complement(2578659..2580044)
Genome browser
AA seq
461 aa
AA seq
DB search
MRSSGNGNGGGNRNSGGGGGGRGNSRGGSSSGGGGYRGSGSGGGSGSGGSRGGSSGGGSR
GGSGSGGSRGGYQGGGSGGSRGGYQGGGSRGGSSGGGYQGGGGYQGGSDSRDRDQPAPRI
RNPRPEERRYDVGPEGERSGRSGPKAGGGGARGAAARGGAKGGPRTSRTPGIGGAGGPRS
GPGSRSGQSRPRELDARIEERVRDRYADKPVIKTPKTFPGAEEEGERLQKVLARAGMGSR
RACEELIEQARVEVNGEIVLEQGKRVLPKDEIKVDGLTVATQSYLFFALNKPAGVVSTME
DPDGRQCLGDYVTNRETRLFHVGRLDTETEGIILLTNHGELAHRLTHPKYGVKKTYVAAI
TGPLPREIGKRLKDGIELEDGYARADHFRVVDQVGKNYLVEVTLHEGRKHIVRRMMAEAG
FPVEKLVRTSFGPIELGDQKSGWLRRLTNTEVGMLMREVGL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcggcaacggcaacggtggcggcaacaggaacagcggcggcggaggcggc
gggcgcggtaactcccgcggcggctcctccagcggcggcggaggctaccgcgggagcggc
tccggcggcggcagcggctccggcggctcccgtggcggcagctccggcggaggctcccgg
ggcggcagcggctccggcggctcccgcggcggctaccagggcggcggctccggcggctcc
cgtggtggctaccagggcggcggctcgcgcggcggcagctccggcggcggctaccagggc
ggtggcggctaccagggcggctccgactcgcgcgaccgcgaccagccggccccccgcatc
cgaaacccgcgtcccgaggagcgccgctacgacgtcggccccgagggcgagcgcagcgga
cgcagcggccccaaggcgggcggcggcggtgcccgcggcgccgcggcgcgcggtggcgcc
aagggcggtccccgtacctccaggacccccggcatcggcggcgccggcggcccgcgcagc
ggccccggcagccggagcggccagtcccgcccgcgcgagctggacgcgcggatcgaggag
cgcgtgcgcgaccggtacgccgacaagcccgtgatcaagaccccgaagaccttcccgggt
gccgaggaggagggcgagcgtctgcagaaggtcctcgcccgcgccggcatgggttcgcgc
cgcgcctgcgaggagctcatcgagcaggcccgcgtcgaggtcaacggcgagatcgtgctg
gagcagggcaagcgagtcctgccgaaggacgagatcaaggtggacggcctgaccgtcgcc
acccagtcgtacctgttcttcgcgctgaacaagcccgccggtgtcgtctccaccatggag
gacccggacggccgtcagtgcctcggcgactacgtcaccaaccgcgagacccgtctcttc
cacgtcggccggctcgacaccgagacggagggcatcatcctgctcaccaaccacggtgag
ctggcccaccgcctcacgcacccgaagtacggcgtgaagaagacgtacgtggcggccatc
accggcccgctgccgcgcgagatcggcaagcggctcaaggacggcatcgagctggaggac
ggctacgcccgcgccgaccacttccgcgtcgtcgaccaggtcggcaagaactacctggtc
gaggtcaccctccacgagggccgcaagcacatcgtccgccgcatgatggcggaggccggc
ttcccggtcgagaagctcgtccggacctccttcggtccgatcgagctgggcgaccagaag
tccggctggctgcgccgcctgaccaacaccgaggtcggcatgctgatgcgcgaggtcggc
ctctag
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