Streptomyces nojiriensis: JYK04_02620
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Entry
JYK04_02620 CDS
T07326
Symbol
rapA_1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
snf
Streptomyces nojiriensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
Trypan_PARP
AAA_22
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QTI44839
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Position
complement(2786323..2789241)
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AA seq
972 aa
AA seq
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MTPQPQPQPQPQPQPQPQPQPQPQPQPQPQRPWPREAAALLRHAAVFLPAAVPREGRVAF
WAPDGDALPEAGTAAPLTVVRPHGDGVRSRTVPAVSFSVTAALPLLAQAPHSPAAHPATR
AWGTAARQALTLAARGRLLPGLTPEGVDAWRAGPLDAADVDHLRAVAAALPHEGYATPLA
GRRPLQLPEPEALVRAFLDAVADGLPRTPAAAVAAGRPFAARDPQRVPGIQDWAAQVAAG
SDTGVGISLRLDLSSFRLFDEAEDADTRRAGAAVVQVHSLADPTLVTDAAQLWAGTAAAG
FGPRARIDAVLALRRAARVWPPLLRLLDQPVPDALALSDPELEDLLGVAASRLAAAGVLV
HWPRELARTLSATAVVRSTAPGSAIDGTAFFDAEHLFAFSWELALGGDRLTPGEMDALAQ
AHRPVVRLRDRWVRVDPELVRKARKRELGVLDPVDALATVLSGTAEIEGATVEAVPVGAL
AALRDRLTGEQAPLPQPAALKATLRDYQARGLAWLDLMTSLGLGGCLADDMGLGKTVTLI
ALHLHRDRPEPTLVVCPASLLGNWQREIEKFAPGTPVRRFHGNSRSTEDLTSCAGGFVLT
TYGTMRASAALLAEQRWGLVVADEAQHVKNPHSATAKALRTVPAPARVALTGTPVENNLS
ELWALLDWTTPGLLGPLTTFRARHARPVEHQQEEDGGNEAAVARLSALVRPFLLRRKKSD
PGIAPELPPKTETDHPVSLTREQASLYQAAVDEAMAVIESSEGMERRGMIMKLLASLKQI
CNHPAQYLKEEQPRIPHRSGKLALLDELLDTILAEGGSVLVFTQYVTMGRLIERHLAGRG
IASQFLHGGTPVPHREELVDRFQAGEVPVFLLSLKAAGTGLNLTRAGHVIHFDRWWNPAV
EEQATDRAYRIGQTQPVQVHRIIAEGTVEDRIAEMLESKRALADAVLGSGESALTELTDR
ELADLVSLRRPG
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcag
ccgcagccgcagccgcagccgcagccgcagcgaccgtggccgcgtgaggccgccgcgctg
ctgcgccacgctgcggtcttcctgcccgccgccgtcccccgcgaggggcgcgtcgccttc
tgggcgcctgacggggacgccctgcccgaggcgggaacggcggcgccgctcaccgtcgta
cgcccgcacggtgacggggtccgcagccggaccgtccccgcggtgagcttctccgtcacc
gccgccctgcccctgctcgcgcaggcgccccacagtcccgccgcgcatcccgccacccgc
gcctggggcaccgccgcccggcaggcgctcaccctcgccgcccgtggccggctcctcccc
ggactcacccccgagggcgtcgacgcctggcgtgccgggccgctcgacgccgccgacgtc
gatcacctccgcgcggtcgccgccgcgctgccgcacgaggggtacgcgacgcccctggcc
gggcgccgcccgctccagctgcccgaaccggaggcactggtccgcgcgttcctcgacgcg
gtcgccgacggcctgccccgcaccccggccgctgccgtggccgccgggcggccgttcgcc
gcgcgggacccgcagcgggtccccgggatacaggactgggcggcgcaggtcgcggccggc
tccgacaccggcgtcgggatctcgctccggctcgacctgtcctccttccggctcttcgac
gaggccgaggacgccgacacgagacgcgccggagccgccgtcgtccaggtgcacagcctt
gccgacccgaccctggtcaccgacgccgcgcagctgtgggcgggcacggcggcggccggg
ttcggcccgcgcgcccggatcgacgccgtgctcgcgctgcgccgggccgcccgggtctgg
ccgccgctgctgcgcctgctggaccagcccgtgcccgatgccctggccctgtccgacccg
gagctggaggacctgctgggggtggccgcgagccggctggccgccgccggggtcctggtc
cactggccgcgcgagctggcccgtacgctgtcggcgaccgccgtcgtacggtccaccgcg
cccggttcggcgatcgacgggaccgcgttcttcgacgccgagcacctcttcgccttctcc
tgggagctggcgctgggcggcgaccggctcacccctggggagatggacgcgctggcccag
gcgcaccggcccgtcgtccggctgcgcgaccggtgggtgcgcgtcgatccggagctggtg
cgcaaggcgcgcaagcgggagctcggcgtcctggacccggtcgacgcgctggccaccgta
ctgtcggggacggccgagatcgaaggcgccacggtcgaggcggtgccggtgggagcgctg
gccgccctgcgggaccggctgacgggggagcaggccccgctgccgcagcccgccgccctc
aaggccaccctgcgcgactaccaggcgcgcggcctggcctggctcgacctgatgacctcg
ctcggtctcggcggctgcctcgccgacgacatgggcctcggcaagaccgtcacgctgatc
gcgctgcacctgcaccgggaccggccggagcccaccctcgtggtgtgccccgcgtccctc
ctcggcaactggcagcgggagatcgagaagttcgcccccggcacgcccgtgcgccgcttc
cacggcaacagccgcagcaccgaggacctcacgtcctgcgcgggcgggttcgtcctcacc
acgtacggcacgatgcgcgccagcgcggccctgctcgcagaacagcgctggggcctggtc
gtcgccgatgaggcgcagcacgtcaagaacccgcattcggcgaccgcgaaggcactgcgc
acggtgcccgcgccggcccgggtggcgctgaccggtacccccgtggagaacaacctctcc
gagctctgggcgctgctcgactggaccacgccggggctgctgggcccgctcaccaccttc
cgggcccgccacgcccgcccggtggagcaccagcaggaggaggacggcggcaacgaggcg
gcggtcgcccggctgtccgcgctggtgcggccgttcctgctgcgccgcaagaagtccgac
cccggcatcgcgcccgagctgccaccgaagacggagaccgaccatccggtctccctcacc
agggagcaggcctcgctctaccaggcggcggtggacgaggcgatggccgtgatcgagtcg
agcgagggcatggaacggcgcggcatgatcatgaagctgctggcctcgctcaagcagatc
tgcaaccaccccgcgcagtacctgaaggaggagcagccccggatcccgcaccgctcgggc
aagctcgccctgctggacgagctgctggacacgatcctcgccgagggcggctcggtgctg
gtcttcacccagtacgtgacgatgggccgcctgatcgaacggcacctggccggccgcggg
atcgcctcgcagttcctgcacggcgggacgccggtgccgcatcgcgaggagctcgtcgac
cgcttccaggcgggcgaggtacccgtcttcctgctgtccctgaaggcggccggcaccggg
ctgaacctcacgcgggccgggcacgtcatccacttcgaccgctggtggaacccggccgtc
gaggaacaggccaccgaccgcgcctaccgcatcggccagacccagcccgtacaggtccac
cggatcatcgccgagggcaccgtcgaggaccggatcgcggagatgctggagtcgaagcgg
gccctggccgacgccgtcctgggctccggcgagtcggcactgaccgagctgaccgaccgc
gagctggccgacctcgtctccctgcggaggcccggatga
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