Streptomyces nojiriensis: JYK04_02635
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Entry
JYK04_02635 CDS
T07326
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf03030
DNA replication
snf03410
Base excision repair
snf03420
Nucleotide excision repair
snf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYK04_02635 (polA_1)
03410 Base excision repair
JYK04_02635 (polA_1)
03420 Nucleotide excision repair
JYK04_02635 (polA_1)
03440 Homologous recombination
JYK04_02635 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_02635 (polA_1)
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_02635 (polA_1)
Enzymes [BR:
snf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYK04_02635 (polA_1)
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JYK04_02635 (polA_1)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JYK04_02635 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYK04_02635 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QTI44854
LinkDB
All DBs
Position
complement(2804372..2807092)
Genome browser
AA seq
906 aa
AA seq
DB search
MADSASKKTDQTTAGDRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSTEFPEYKANRSKTPDEFKGQVELIGELLDTMHVPRF
AVEGFEADDVIATLATQAEAAGFDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVEEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWITQFGSFAELVERAEEVKG
KAGQNFRDHLEAVKLNRVLTEMVKDVELPKTPADLVRVPYDRTAMLGVLDVLEIRNASLR
ERLLAVDPGAAVEEAPAPAAGVELDASVLATGELAPWLESHAGGPLGIATVDSWALGQGS
VTEIALAAAGGAAAWFTPAELDEADERAFAAWAADAARPKVVHNAKGLMRVFPEHGWTLA
GVAMDTALAAYLVKPGRRSFALDALSMEYLHRELAPAAADGQLAFGADETAEAEALMGQA
RAVLDLGDAFTDKLAEVGAAELLHDMELPTSELLARMERSGIAADRDHLEAMEQQFAGAV
QQAVKEAHATVGHEFNLGSPKQLQEVFFGELDLPKTKKTKTGYTTDADALAWLATQTDHE
LPVIMLRHREQAKLRVTVEGLVKTIGADGRVHTSFSQIVAATGRLSSTDPNLQNVPVRTD
EGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFATGEDLHTTVASQVFG
VERSEVDAEMRRKIKAMSYGLAYGLSAFGLAQQLNIEPAEARGLMETFFERFGGVRDYLG
RVVDEARATGYTATIFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKVAMLRV
DKAIAEAGLRSRMLLQVHDEIVLEIAPGEREQVEELVRREMGAAVELRAPLDVSVGVGPD
WESAAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtggcagattcagcatcgaagaagacggaccagacgaccgcaggggaccgcccccgcctg
atgctcatggacgggcactccctggcgtaccgggcgttcttcgcgctgcccgcggagaat
ttcacgaccgcgacggggcagccgaccaacgccatctacggattcgcgtcgatgctggcg
aacacgctgcgcgacgaggcccctacgcacttcgcggtggcgttcgacgtctcccgcaag
acgtggcgttcgacggagttccccgagtacaaggcgaaccgctccaagacccccgacgag
ttcaaggggcaggtcgagctgatcggcgagctgctcgacacgatgcacgtgccgcggttc
gcggtcgagggcttcgaggccgacgacgtgatcgcgacgctggcgacgcaggccgaggcg
gccggcttcgacgtgctgatcgtcaccggcgaccgggactccttccagctcgtctccgag
cacaccaccgtgctctacccgaccaagggcgtctccgagctcacccggttcaccccggag
aaggtcgaggagaagtacggcctcaccccgcagcagtacccggacttcgcggcactgcgc
ggcgacccgtccgacaacctgccgggcatcccgggcgtcggtgagaagaccgcggccaag
tggatcacccagttcgggtcgttcgccgagctcgtggagcgcgccgaggaggtcaagggc
aaggccgggcagaacttccgggaccacctggaggccgtcaagctcaaccgggtcctgacc
gagatggtcaaggacgtcgagctgcccaagaccccggccgacctggtccgcgtcccctac
gaccggaccgccatgctcggcgtgctggacgtactggagatccgcaacgcctcgctgcgc
gagcggctgctcgccgtggacccgggcgctgccgtggaggaggccccggctccggcggcc
ggagtggaactggacgcttccgtcctggccaccggcgagctggcgccctggctggagagc
cacgcgggcggcccgctgggcatcgcgaccgtcgacagctgggcgctcggccagggcagc
gtcaccgagatcgcgctggccgcggccggcggcgccgccgcctggttcacgcccgccgag
ctggacgaggcggacgagcgggccttcgcggcctgggccgccgacgcggcgaggcccaag
gtcgtgcacaacgccaagggcctgatgcgggtcttccccgagcacggctggaccctcgcc
ggtgtcgccatggacaccgcgctcgccgcctacctggtcaagccgggccgccggtccttc
gccctggacgccctgtccatggagtacctgcaccgcgagctggcgcccgccgccgccgac
gggcagctggccttcggcgccgacgagaccgccgaggccgaggccctgatgggacaggcc
cgcgcggtcctggacctgggcgacgccttcacggacaagctcgccgaggtcggcgccgcg
gagctgctccacgacatggagctgcccacctccgaactcctcgcccggatggagcgctcc
ggcatcgccgccgaccgcgaccacctggaggccatggagcagcagttcgcgggagccgtg
cagcaggccgtcaaggaggcgcacgccaccgtcggccacgagttcaacctcggctcgccc
aagcagctccaggaggtcttcttcggcgagctggacctgccgaagacgaagaagaccaag
accggctacaccacggacgcggacgcgctggcctggctggccacgcagaccgaccacgaa
ctcccggtgatcatgctgcggcaccgggagcaggccaagctgcgcgtcaccgtcgagggc
ctggtcaagaccatcggcgccgacggccgggtgcacaccagcttcagccagatcgtcgcc
gcgaccggccggctgtcctccaccgaccccaacctgcagaacgtgccggtgcgcaccgac
gaaggccgggccatccgccgcggcttcgtcgtcggcgagggcttcgagtccctgatgacg
gccgactacagccagatcgagctgcgcgtcatggcccacctctccgaggacgagggcctg
atcgaggcgttcgcgaccggcgaggacctgcacaccaccgtcgcctcccaggtgttcggc
gtggagcggtccgaggtcgacgccgagatgcgccgcaagatcaaggccatgtcgtacgga
ctcgcctacgggctctccgcgttcggcctcgcccagcagctgaacatcgagcccgccgag
gcgcgcggcctgatggagaccttcttcgagcggttcggcggggtccgcgactacctcggc
cgggtcgtcgacgaggcccgcgccaccggatacacggcgacgatcttcggccgccgccgg
tacctgcccgacctcaacagcgacaaccgccagcgccgcgaggccgccgagcggatggcg
ctcaacgcccccatccagggcaccgccgccgacatcgtcaaggtcgcgatgctgcgcgtg
gacaaggcgatcgccgaggccggcctgcggtcgcggatgctgctccaggtccacgacgaa
atcgtgctggagatcgccccgggcgagcgcgagcaggtcgaggagctggtccggcgcgag
atgggcgccgccgtcgagctccgggccccgctggacgtgtcggtgggcgtcggcccggac
tgggagtccgccgcgcactga
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