Streptomyces nojiriensis: JYK04_02902
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Entry
JYK04_02902 CDS
T07326
Symbol
amy
Name
(GenBank) Alpha-amylase
Organism
snf
Streptomyces nojiriensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
Pullul_strch_C
Pullulanase_N2
CBM_48
Big_7
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
QTI45119
LinkDB
All DBs
Position
complement(3090726..3096074)
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AA seq
1782 aa
AA seq
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MIRPAAGVLAAALAVTLLPALPAAAATGGPPAPPTDAKLAAEPARHDLTREQFYFVLPDR
FANGDPGNDRGGLTGSRLETGLDPTDKGFYQGGDLKGLTDKLDYIKGLGTTAIWLAPIFK
NQPVQGKGADVSAGYHGYWITDFTQVDPHFGTNADLERLIDKAHGKGMKVFFDVITNHTA
DVVDYREASYSYLSKGAFPYLTKDGVPFEDKDYADGKAKFPKVDGESFPRTPFVPDAKKN
LKVPGWLNDPTMYHNRGDSTFAGESSDQGDFVGLDDLWTERPEVVSGMEKIYEKWVRDFR
IDGFRIDTVKHVNTEFWTQWATALDAYAAERGRDDFFMFGEVYSADTAVTSPYVTRGKLD
ATLDFPLQDAIRAYASQGAAAGRLGSVLGDDYRYTSGKANAYEQVTFLGNHDMGRFGTFL
KQDRPGAGEQELLERYRLANELMFFARGNPVIYSGDEQGFTGAGGDKDARQPLFATQVAD
YLDDDQLGTVRTHASDAYDPGHPLYQQISALSKLTKAHPALRDGVQSERFADGSVYAFAR
TDTKTRTEYLVAANNGAESRTVEIDAPAGAQYRTLYGGTALIRASAAGKLTVPVPALGSV
VLQAVAPAAKPTVKPTLTLKAPAPGATGTVELSADVSGGGLNRVVFAAQTGNEKWQVLGT
ADHAPYKVTQHLDAKTPAGTALRYKAVVVDSAGRSASALAASATGQAPPTEIPTATQRDH
AVVHYNRPDGDYTDWRLYAWGDLADGEATPWPAGHDFTGRDAYGAFAYVKLKPGASSVGY
LVIDKDGNKDVAADRTIDVTKTGEIWLEQGKEPARTDRPAYPPQDQNKAVLHYQRPDRAY
DGWGLHVWTGAAAPTDWSKPLPPTRTDSYGAVYEVPLAPGATSLSYILHKGDEKDLPTDR
SLDLKATGHEVWMLGGQEKYLLPQPAGSAAALDLTESEAVWIDRDTLAWNAPATAASVQL
LASRDGAVKAENGTLTGRAQWLRLGKAELTAAQKQKFPHLASYGAYTVDPRDRDRVREAL
RGQLVASARAANGAVLAATGVQLAGVLDDLYATTASLGPVFKDGRPTLSVWAPTARQVSL
ELDGRTVAMRRDDATGVWSVRGERSWTGKPYRYDVTVWAPSTRQVVRNLVTDPYSTALTA
DSVHSLVVDLADPKLAPPGWKTLRKPAPVPFTSAQIQELHIRDFSVADRTTTHPGQYLAF
TDTASAGMRHLRDLAAAGTSYVHLLPAFDIGTVPEKAADRTEPACDLKVYAPDSQEQQAC
VAAAAAKDAYNWGYDPLHYTVPEGSYASDPNGTARTVEFRRMVQSLNGSGLRTVMDVVYN
HTVAAGQSDKSVLDRIVPGYYQRLLPDGSVATSTCCANTAPENAMMGRLVVDSIVTWAKE
YKVDGFRFDLMGHHPKANILAVRSALDALTVAKDGVDGKKIVLYGEGWNFGEIADDARFV
QATQKNMAGTGIATFSDRARDAVRGGGPFDEDPRVQGFASGLFTAPNASPANGTPEQQKA
RLLHAQDLIKVGLSGNLASYAFTDTTGRRIKGSELDYNGAPAGYAAAPGDALAYADAHDN
ESLADALTYKLPTGTAPRDQARMQVLAMATATLSQGPALSQAGTDLLRSKSLDRNSFDSG
DWFNAIHWDCRDGNGFGRGLPPAADNASKWLYAKPLLTGPAPTCTDIGATSAAYRDLLRI
RTTEPDFALTTTEAVQSRLAFPLSGKDETPGVITMTLGDLVVVFNAAPTAQAQRVPALAG
TGYKLHPVQAAGSDATVKQSAYDAKTGEFTVPARTVSVFTRR
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
ttgatacgccctgccgcaggagtgctcgccgccgccctggccgtgacgctcctgcccgcc
ctccccgccgcggccgcgaccggcgggccgcccgccccgcccacggacgcgaaactggcc
gccgaaccggcccggcacgacctgacccgggagcagttctacttcgtgctcccggaccgc
ttcgcgaacggcgacccgggcaacgaccggggcggcctgaccggctcgcgcctggagacc
ggcctggaccccacggacaagggcttctaccagggcggtgacctcaaggggctcaccgac
aagctcgactacatcaaggggctcggcaccacggccatctggctggcgccgatcttcaag
aaccagccggtgcagggcaagggggccgatgtctccgccggctaccacggctactggatc
accgacttcacgcaggtcgacccgcacttcgggaccaacgccgacctggagcggctgatc
gacaaggcgcacgggaaggggatgaaggtcttcttcgacgtcatcaccaaccacaccgcc
gacgtcgtggactaccgggaggcgtcgtactcgtacctgtcgaagggggcgttcccctac
ctgaccaaggacggggtgccgttcgaggacaaggactatgcggacgggaaggcgaagttc
ccgaaggtggacggggagtccttcccgaggactccgttcgtgccggacgcgaagaagaac
ctgaaggtgccgggctggctcaacgacccgacgatgtaccacaaccgaggggactccacc
ttcgcgggcgagtcctcggaccagggcgacttcgtcggtctcgacgacctgtggaccgag
cgtcccgaggtcgtcagcgggatggagaagatctacgagaagtgggtgcgggacttccgg
atcgacggcttccggatcgacacggtcaagcacgtcaacaccgagttctggacgcagtgg
gcgaccgccctcgacgcctacgcggccgagcgcggccgtgacgacttcttcatgttcggc
gaggtctactccgccgacacggccgtgacctccccctacgtgacccgcgggaagctcgac
gccaccctcgacttcccgctccaggacgcgatccgcgcgtacgcctcccagggcgcggcg
gccggccggctgggctccgtcctcggcgacgactaccggtacacctcgggcaaggccaac
gcctacgagcaggtgaccttcctcggcaaccacgacatgggccgtttcggcaccttcctg
aagcaggaccggccgggggccggggagcaggagctgctggagcgctaccggctggccaac
gagctgatgttcttcgcccggggcaatccggtgatctactccggtgacgagcagggcttc
actggggccggcggcgacaaggacgcccggcagccgctgttcgccacgcaggtcgccgac
tacctggacgacgaccagctcggaacggtgcgcacgcacgcgagcgatgcttacgatccg
ggacacccgctctaccagcagatcagtgctctctcgaagctgacgaaggcgcacccggcc
ctccgcgacggcgttcagagcgaacgtttcgccgacggctcggtctacgccttcgcccgc
accgacaccaagacccgcaccgagtacctggtcgccgccaacaacggcgccgaatcccgc
accgtcgagatcgacgccccggccggcgcccagtaccgcaccctctacggcggcaccgcc
ctcatccgcgcctcggcggccggcaagctcaccgtgcccgtgcccgccctcggctccgtg
gtcctccaggccgtcgcgcccgccgccaaacccaccgtcaagcccaccctgaccctgaag
gccccggcccccggcgccaccggcaccgtcgagctctccgccgacgtcagcggcggcggc
ctgaaccgcgtcgtcttcgccgcccagaccggcaacgagaagtggcaggtcctcggcacc
gccgaccacgccccctacaaggtcacccagcacctcgacgccaagaccccggccggcacc
gcactgcgctacaaggccgtcgtcgtcgactccgccggccgcagcgcgagcgccctcgcc
gcctccgccaccggccaggccccgcccaccgagatccccaccgccacccagcgcgaccac
gcggtcgtccactacaaccgccccgacggcgactacaccgactggcgcctgtacgcctgg
ggcgacctcgccgacggcgaagccaccccctggccggccggccacgacttcaccggccgc
gacgcctacggcgccttcgcgtacgtcaagctgaagcccggcgcctcctccgtcggctac
ctcgtcatcgacaaggacggcaacaaggacgtcgccgccgaccgcaccatcgacgtgacg
aagaccggcgagatctggctggaacagggcaaggagcccgcccgcaccgaccgccccgcc
tacccgccgcaggaccagaacaaggccgtcctgcactaccagcgccccgaccgcgcctac
gacggctggggcctgcacgtctggaccggggccgccgcccccaccgactggtccaagccg
ctcccgcccacccgcaccgactcctacggcgcggtctacgaggtccccctcgcgcccggc
gccaccagcctcagctacatcctccacaagggcgacgagaaggacctccccaccgaccgg
tccctggacctgaaggccaccggccacgaggtctggatgctgggcggccaggagaagtac
ctcctgccgcagcccgccggatccgccgccgccctggacctcaccgagtccgaggccgtc
tggatcgaccgcgacaccctcgcctggaacgcccccgccacggccgcctccgtacagctc
ctcgcctcccgcgacggcgccgtcaaggccgagaacggcaccctgaccggccgcgcccag
tggctgcggctgggcaaggccgagctcaccgccgcccagaagcagaaattcccgcacctc
gcctcgtacggcgcgtacaccgtcgacccgcgcgaccgcgaccgggtccgcgaggccctg
cgcggccagctcgtcgcgagcgcccgcgccgcgaacggcgcggtcctcgccgccaccggc
gtccagctcgccggcgtcctcgacgacctctacgcgaccaccgcctccctcggccccgtc
ttcaaggacggccgccccaccctctccgtctgggcccccaccgcccggcaggtctccctc
gaactcgacggccgcacggtcgccatgcgccgcgacgacgccaccggcgtctggtcggtg
cgcggcgaacgctcctggaccggcaagccctaccgctacgacgtgaccgtctgggccccg
agcacccgccaggtggtccgcaacctcgtcaccgacccctactccaccgcactcaccgcg
gactccgtccacagcctggtcgtcgacctggccgacccgaagctcgccccgcccggctgg
aagaccctgcgcaagcccgcgcccgtccccttcacctccgcgcagatccaggagctgcac
atccgtgacttctccgtcgcggaccgcaccaccacccaccccggccagtacctggccttc
accgacaccgcctcggcgggcatgcggcacctgcgcgacctggccgccgccggaacctcc
tacgtccacctcctgccggccttcgacatcggcaccgtcccggagaaggccgccgaccgc
accgagcccgcctgcgacctcaaggtgtacgccccggactcgcaggaacagcaggcctgt
gtggccgccgcggccgcgaaggacgcgtacaactggggctacgacccgctgcactacacc
gtccccgagggcagctacgccagcgacccgaacggcacggcccgcaccgtcgagttccgc
aggatggtccagtccctcaacgggtccgggctgcgcacggtgatggacgtcgtctacaac
cacaccgtcgccgcgggccagtcggacaagtcggtcctcgaccgcatcgtccccggctac
taccagcgcctgctgcccgacggcagcgtcgccacctccacctgctgcgccaacaccgcc
cccgagaacgccatgatggggcgcctggtcgtcgactcgatcgtcacctgggcgaaggag
tacaaggtcgacgggttccgcttcgacctgatgggccaccacccgaaggccaacatcctc
gccgtccgctcggccctcgacgccctgacggtcgccaaggacggggtcgacggcaagaag
atcgtcctctacggagagggctggaacttcggcgagatcgccgacgacgcccgcttcgtg
caggccacgcagaagaacatggcgggaaccggcatcgccaccttctccgaccgggcccgt
gacgccgtccgcggcggcggccccttcgacgaggacccgcgcgtccagggcttcgcgtcc
gggctgttcaccgccccgaacgcctcgcccgccaacggcacccccgagcagcagaaggcc
cgcctcctgcacgcccaggacctgatcaaggtcgggctctccggcaacctggcctcgtac
gccttcaccgacaccaccggccgccgcatcaagggctccgagctggactacaacggcgcc
ccggccggctacgcggccgcccccggcgacgccctcgcctacgccgacgcccacgacaac
gaatccctcgccgacgccctgacctacaagctcccgaccggcaccgccccccgcgaccag
gcccgcatgcaggtcctggccatggcgacggccaccctgtcccagggcccggccctctcc
caggcgggcaccgacctgctccgctccaagtccctggaccgcaactccttcgacagcggg
gactggttcaacgccatccactgggactgccgggacggcaacggcttcggccgcggtctg
ccgccggccgccgacaacgcctcgaaatggctctacgcgaagccgctcctgacgggaccg
gcgcccacctgcaccgacatcggcgccacctcggccgcctaccgcgacctgctgcgcatc
cgcaccaccgagccggacttcgccctcaccacgaccgaggcggtccagtcccggctggcc
ttccccctctcgggcaaggacgagaccccgggcgtgatcaccatgaccctcggcgacctg
gtggtcgtcttcaacgcggcccccaccgcccaggcccagcgcgtccccgccctcgccggc
accggctacaagctgcacccggtccaggccgcgggctccgacgccaccgtcaagcagtcc
gcgtacgacgcgaagacaggagagttcaccgtccccgcccgcaccgtctcggtcttcaca
cggcgctga
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