Streptomyces nojiriensis: JYK04_03545
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Entry
JYK04_03545 CDS
T07326
Symbol
hup_1
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_03545 (hup_1)
03036 Chromosome and associated proteins [BR:
snf03036
]
JYK04_03545 (hup_1)
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_03545 (hup_1)
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYK04_03545 (hup_1)
Chromosome and associated proteins [BR:
snf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JYK04_03545 (hup_1)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JYK04_03545 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
A_thal_3526
Motif
Other DBs
NCBI-ProteinID:
QTI45743
LinkDB
All DBs
Position
complement(3784148..3784429)
Genome browser
AA seq
93 aa
AA seq
DB search
MNRSELVAALSERAEVTRKDADAVLAALAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPIQIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgctctgtccgagcgcgccgaggtgacccgcaaggac
gccgacgccgttctggccgcgctcgccgagaccgtcggcgagattgtcgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcgcgcaacccgcagaccggcgaccccatccagatcccggccggctacagcgtgaaggtc
tccgcgggctccaagctcaaggaagccgccaagggcaagtaa
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