Streptomyces nojiriensis: JYK04_04252
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Entry
JYK04_04252 CDS
T07326
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_04252
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JYK04_04252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
TrwB_AAD_bind
ResIII
AAA_10
AAA_30
AAA_16
Zeta_toxin
T2SSE
HupH_C
Motif
Other DBs
NCBI-ProteinID:
QTI46424
LinkDB
All DBs
Position
complement(4548761..4550380)
Genome browser
AA seq
539 aa
AA seq
DB search
MSESTDPAPPADRPDPAGPAGEIAAGYAFTGPALDLGALLWDGDCLPDRQIRIPLAMLGR
HGLVAGATGTGKTKTLQLITEQLSAGGVPVFLADVKGDLSGISVPGTAGDRVGERARDVA
QSWEPTGYPCAFYSLGGIGPGIPLRSTVTSFGPVLMSKVLQLNQTQEQSLGLIFHYADTK
GLELIDLKDLRAVVAFLVSDQGRPELKGIGGLSTVTAGVILRALTAFEQQGASEFFGEPE
FDTGEFLRTAADGRGLVSVLELPAVQDKPQLFSTFLMWLLADLYNDLPEVGDLEKPKLVF
FFDEAHLLFDGASKAFLAAITRTVRLIRSKGVGVFFVTQTPKDVPSDVLAQLGNRVQHAL
RAFAPDDAKALKAAVKTFPRSAYDLEELLTQLGTGEAVVTVLSENGAPTPVAATRLRAPQ
SLMGPIAAADLEQAVKSSPLWSRYAAPVDRESAYEKIGAEQAAAEARAEAAAAAAEAEKQ
AEEAQKQAARAARSTPKPDPSLAEQVVGSGLFRSLARSIGTQVGREISRSIFGTARRRR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagcaccgaccccgcccctccggcggaccggccggacccggcgggcccggcc
ggggagatcgccgccgggtacgcgttcaccggacccgcgctcgacctcggggccctcctc
tgggacggcgactgcctgcccgaccgtcagatccgcatccccctggcgatgctgggccgc
cacggactggtcgccggagccaccggaaccggcaagaccaagacgctccagctcatcacc
gaacagctgtcggcaggcggcgtccccgtcttcctcgccgacgtcaagggcgacctctcg
gggatctcggtgcccgggacggcgggcgacagggtcggcgaacgggcccgggacgtggcc
cagtcgtgggagcccaccggatacccctgcgcgttctactcgctgggcgggatcggcccg
gggatcccgctgcggtccacggtcaccagcttcggtccggtgctgatgtcgaaggtgctc
cagctcaaccagacgcaggagcagtccctcggcctgatcttccactacgccgacaccaag
ggcctggagctgatcgacctcaaggacctgcgcgcggtcgtcgccttcctcgtctccgac
cagggcagacccgaactcaaggggatcggcggactgtccacggtgacggccggggtgatc
ctgcgggcgctcaccgccttcgagcagcagggcgcctcggagttcttcggcgagcccgag
ttcgacacgggcgagttcctgcggacggccgccgacgggcgcggcctggtctccgtactg
gaactcccggcggtccaggacaagccgcagctcttctccaccttcctgatgtggctgctc
gccgacctctacaacgacctgccggaggtcggcgacctggagaagcccaagctcgtcttc
ttcttcgacgaggcgcacctgctcttcgacggggcctccaaagccttcctcgcggccatc
acccggacggtccggctcatccgctccaagggcgtcggcgtcttcttcgtcacccagacc
cccaaggacgtgccgtcggacgtcctcgcccagctcggcaaccgggtgcagcacgcgctg
cgcgccttcgcccccgacgacgccaaggcgctgaaggcggccgtgaagaccttcccccgc
tccgcgtacgacctggaggagctgctcacgcagctggggaccggcgaggcggtcgtcacc
gtgctcagcgagaacggcgccccgaccccggtcgcggcgacccggctgcgggccccgcag
tcgctgatgggaccgatcgcggcggcggacctggagcaggccgtgaagtcctccccgctc
tggtcgcgctacgcggcgccggtcgaccgcgagtcggcgtacgagaagatcggcgccgaa
caggccgccgcggaggcgcgggcggaggccgccgcggccgcagccgaggccgagaagcag
gccgaggaggcgcagaagcaggccgcgcgggccgcgcgcagcaccccgaagccggacccc
tcactggccgagcaggtggtggggagcgggctgttccgctcgctggcccggtcgatcggg
acacaggtgggccgggagatctcgcgctcgatcttcgggacggcgcgcaggcgccggtga
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