Streptomyces nojiriensis: JYK04_04263
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Entry
JYK04_04263 CDS
T07326
Symbol
sigF_5
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snf03021
]
JYK04_04263 (sigF_5)
Transcription machinery [BR:
snf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK04_04263 (sigF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
NirdL-like_HTH
GerE
DUF4423
HTH_Crp_2
MarR
HTH_Tnp_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QTI46434
LinkDB
All DBs
Position
4556320..4557216
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AA seq
298 aa
AA seq
DB search
MTVPASTAPQVPPQQDPQVPPQPEPQREHRQEPPEEPPAAPRPPSRGADTRALTQVLFGQ
LKGLQPGTGEHSRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDP
DRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNAATEDLTTLHGRTPTTA
EIAERLRITEDEVLSCIEAGRSYHATSLEAAQEGDGMPGLLDRLGYEDPELAGVEHRDLV
RHLLVQLPEREQRILLLRYYNNLTQSQISVELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgccggccagtactgcgcctcaagtgccgccccagcaggacccccaggtaccg
ccccagccggagccccagcgggaacaccgccaggagccgcccgaggagcccccggccgcg
ccgagaccgccgagcaggggcgcggacacccgggcgctcacccaggtcctcttcggccag
ctgaagggcctccagccgggcaccggcgagcacagccgggtgcgcggggccctcatcgag
gccaacctcccgctcgtccgctacgcggccgcccgcttccgcagccgcaacgagcccatg
gaggacgtggtccaggtcggcaccatcggcctgatcaacgccatcgaccggttcgacccg
gaccggggcgtgcagttcccgaccttcgcgatgccgaccgtcgtgggcgagatcaaacgg
tacttccgcgacaacgtccgcaccgtccacgtgccgcgccgcctccacgagctctgggtc
caggtcaacgccgccaccgaggacctcaccaccctccacggccgcaccccgaccaccgcc
gagatcgccgagcggctgcgcatcaccgaggacgaggtgctgtcctgcatcgaggccggc
cgcagctaccacgcgacctccctggaggccgcacaggagggcgacggcatgcccgggctg
ctcgaccgcctcggctacgaggacccggagctggccggggtcgagcaccgcgacctcgtc
cgccacctcctcgtacagctgcccgaacgcgagcaacggatcctgctcctgcggtactac
aacaatctgacgcagtcacagatcagcgtggagctcggcgtctcccagatgcacgtctcc
cgactcctcgcccggagcttcgcccgactgagatccgcaaacaggatcgaggcgtaa
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