Streptomyces nojiriensis: JYK04_04378
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Entry
JYK04_04378 CDS
T07326
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
snf
Streptomyces nojiriensis
Pathway
snf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYK04_04378 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snf03016
]
JYK04_04378 (cca)
Enzymes [BR:
snf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
JYK04_04378 (cca)
Transfer RNA biogenesis [BR:
snf03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
JYK04_04378 (cca)
Prokaryotic type
JYK04_04378 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QTI46545
LinkDB
All DBs
Position
complement(4675869..4677452)
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AA seq
527 aa
AA seq
DB search
MCECRALLHMIGSGPRGPCAGVAAKRGGPRRAGHVPFSVVPNANEDNPSALSQVQRRAVS
ELLRVAPVADELGRRFQEAGFRLALVGGSVRDALLGRLGNDLDFTTDARPEDVLKIVRPW
ADSVWDVGIAFGTVGAHKSARVGDAVRNFQIEVTTYRSEAYDRTSRKPEVSYGDSIDEDL
VRRDFTVNAMALALPEQEFIDPHGGLEDLAAGVLRTPGTPEESFSDDPLRMLRAARFAAQ
LDFEVAPEVVAAMKAMSERIEIVSAERVQGELNKLILSSHPRKGLGLLVDTGLADRVLPE
LPALRLESDEHHRHKDVYDHSLIVLEQAIALEEDGPDLVLRLAALLHDIGKPRTRRFESD
GRVSFHHHEVVGAKMTKKRLTALKYSNDMIKDVSRLVELHLRFHGYGDGEWTDSAVRRYV
RDAGPLLERLHKLTRSDCTTRNKRKANALSRTYDGLEERIAQLQEQEELDAIRPDLDGNE
IMQVLDVGPGPVIGKAYAFLLELRLENGPMGRDAAVVELKEWWAAQA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgagtgccgcgccttgctccacatgatcggctcaggaccccggggaccgtgtgcc
ggggtggccgcaaaacggggcggcccccggcgggccgggcacgtacccttttctgttgtg
ccgaacgccaacgaagacaaccccagtgccctgagtcaggtgcagcgccgcgcggtcagt
gaactgctgcgggtcgctcctgtcgccgacgagctcggccgccgtttccaggaggcgggc
ttccgcctcgccctggtcggcgggtccgtccgcgacgcgctgctggggcgtctcggcaac
gatctcgacttcaccaccgatgcccgccccgaggacgttctgaagatcgtccggccgtgg
gcggactcggtgtgggacgtcggtatcgctttcggcaccgtcggggctcacaagagcgcc
cgcgtcggggacgccgtgcggaatttccagatcgaggtgacgacgtaccgatcggaggcc
tacgaccgtacgtcgcgcaagcccgaggtctcctacggcgactcgatcgacgaagacctg
gtgcggcgtgacttcacggtcaacgccatggccctggcgttgcccgagcaggagttcatc
gacccgcacggcggtctggaggacctggccgccggtgtgctgcgtacgcccggaaccccg
gaggagtccttctccgacgacccgctgcggatgctgagggcggcgcggttcgccgcccag
ctggacttcgaggtcgccccggaggtcgtcgcggccatgaaggcgatgtccgagcggatc
gagatcgtttccgcggagcgggtccagggcgaactgaacaagctgatcctgtcctcccac
ccgcgcaagggtctgggactgctggtggacacggggctggccgaccgggtgcttcccgag
ctgcccgcgctgcggctggaaagtgatgagcaccaccgtcacaaggacgtctacgaccac
tcgctgatcgtgctggagcaggcgatcgcgctggaggaggacggcccggacctggtcctg
cggctcgcggccctgctgcacgacatcggcaagccccgcacccgccggttcgaaagcgac
ggcagggtctccttccaccaccacgaggtggtgggcgcgaagatgaccaagaagcggctc
accgccctgaagtactccaacgacatgatcaaggacgtgtcccggctggtggagctgcac
ctgcgcttccacggctacggcgacggggagtggaccgactccgcggtccggcgctacgtc
cgcgacgccggtccgctgctggaacgtctgcacaagctgacccggtccgactgcaccacg
cgcaacaagcgcaaggccaatgccctctcccggacctacgacgggctggaggagcgcatc
gcgcagctgcaggagcaggaggagctggacgcgatccggcccgacctggacggcaacgag
atcatgcaggtgctcgacgtgggccccggtcccgtgatcggcaaggcctacgccttcctg
ctggagctgcggctggagaacggcccgatgggccgtgacgccgccgttgtcgagctgaag
gagtggtgggccgcacaggcctga
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