Streptomyces nojiriensis: JYK04_04399
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Entry
JYK04_04399 CDS
T07326
Symbol
gyrBR_2
Name
(GenBank) DNA gyrase subunit B, novobiocin-resistant
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_04399 (gyrBR_2)
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_04399 (gyrBR_2)
Enzymes [BR:
snf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JYK04_04399 (gyrBR_2)
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Topoisomerases
JYK04_04399 (gyrBR_2)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JYK04_04399 (gyrBR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QTI46565
LinkDB
All DBs
Position
4700920..4702944
Genome browser
AA seq
674 aa
AA seq
DB search
MLCQKGRFVADSGDSNEKNYDASAIQVLEGLDAVRKRPGMYIGSTGERGLHHLVYEVVDN
SVDEALAGHADTIDVTILADGGVRVIDNGRGIPVGIVPSEGKPAVEVVLTVLHAGGKFGG
GGYAVSGGLHGVGVSVVNALSTKVAVEVKTDGHRWTQDYKLGVPTAPLAKNEETAETGTS
VTFWADGDIFETTEYSFETLSRRFQEMAFLNKGLTLSLTDERESAKATAGADDPDADASE
PQARTVKYYYEGGIVDFVKYLNSRKGELIHPTVIDVEAEDKERMLSVEIAMQWNSQYTEG
VYSFANTIHTHEGGTHEEGFRAALTGLVNRYARDKKLLREKDDNLAGEDIREGLTAIISV
KLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLNDWFDRNPVEAADIIRKSIQAATARVAA
RKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNPMYQAILP
IRGKILNVEKARIDKILQNTEVQALISAFGTGVHEDFDIEKLRYHKIILMADADVDGQHI
NTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDRERDALVELGKQNGKR
IKEDSIQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRS
FIQRNAKDVRFLDI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcgactccaacgagaagaattac
gacgccagtgcgatccaggtcctcgagggcctggacgcggtccgcaagcggccgggtatg
tacatcggctcgacgggtgagcgtggtctgcaccacctcgtctacgaggtcgtcgacaac
tcggtcgacgaggcgctggccggacacgcggacaccatcgacgtgacgatcctcgccgac
ggtggggtgcgcgtgatcgacaacggtcgcggtatcccggtcggcatcgttccgtccgag
ggcaagccggccgtcgaggtcgtcctgacggtcctgcacgcgggcggcaagttcggcggc
ggcggctacgccgtctccggtggtctgcacggcgtcggcgtgtccgtcgtgaacgccctg
tcgaccaaggtcgcggtcgaggtcaagacggacggccaccgctggacgcaggactacaag
ctgggcgtgccgacggccccgctggccaagaacgaggagaccgccgagacgggcacctcg
gtcaccttctgggccgacggcgacatcttcgagacgaccgagtactcgttcgagacgctg
tcgcggcgcttccaggagatggccttcctcaacaagggcctgaccctgtcgctgaccgac
gagcgcgagtcggcgaaggccacggcgggtgccgacgacccggacgcggacgcgtccgag
ccccaggcgcgcacggtgaagtactactacgagggcggcatcgtcgacttcgtgaagtac
ctcaactcgcgcaagggcgagctcatccacccgaccgtcatcgacgtcgaggccgaggac
aaggagcgcatgctctcggtcgagatcgcgatgcagtggaactcgcagtacacggagggg
gtctactccttcgcgaacacgatccacacccacgagggcggtacgcacgaggagggcttc
cgtgcggccctgacgggtctggtgaaccgttacgcgcgcgacaagaagctgctgcgcgag
aaggacgacaacctcgccggcgaggacatccgcgagggtctgacggcgatcatctcggtc
aagctgggcgagccccagttcgagggccagacgaagaccaagctgggcaacacggaggcc
aagaccttcgtgcagaaggtcgtccacgaacacctcaacgactggttcgaccgcaacccg
gtcgaggcggcggacatcatccgcaagtcgatccaggcggccacggcgcgcgtcgcggcc
cgcaaggcccgtgacctcacccgtcgcaagggtctgctggagagcgcctcgctgccgggc
aagctgtccgactgccagtcgaacgacccgaccaagtgcgagatcttcatcgtcgagggt
gactcggccggtggctccgcgaagtccggccgcaacccgatgtaccaggccatcctgccg
atccgcggcaagatcctgaacgtcgagaaggcccgtatcgacaagatcctccagaacacc
gaggtccaggcgctgatcagcgccttcggtaccggtgtgcacgaggacttcgacatcgag
aagctccgctatcacaagatcatcctgatggcggacgccgacgtcgacggccagcacatc
aacaccctgctgctgaccttcctcttccgcttcatgcggccgctggtcgaggccggtcac
gtgtacctgtcgcgcccgcccctctacaagatcaagtggggccgggacgacttcgagtac
gcgtactcggaccgcgagcgcgacgcgctggtggagctcggcaagcagaacggcaagcgg
atcaaggaagactcgatccagcgcttcaagggtctgggcgagatgaacgccgaggaactg
cgcgtcaccaccatggacgtggaccaccgtgtcctcggccaggtcaccctcgacgacgcg
gcacaggccgacgacctgttctcggtgctgatgggtgaggacgtcgaggcgcggcgctcc
ttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
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