Streptomyces nojiriensis: JYK04_04400
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Entry
JYK04_04400 CDS
T07326
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_04400 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_04400 (gyrA_1)
Enzymes [BR:
snf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JYK04_04400 (gyrA_1)
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Topoisomerases
JYK04_04400 (gyrA_1)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JYK04_04400 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QTI46566
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Position
4702988..4705606
Genome browser
AA seq
872 aa
AA seq
DB search
MADETTPTAENAAEEQPVLRIEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRR
VLYAMYDGGYRPEKGFYKCARVVGDVMGTYHPHGDSSIYDALVRLAQPWSMRMPLVDSNG
NFGSPGNDPAAAMRYTECKLMPQAMEMLRDIDEETVDFQDNYDGRNQEPTVLPARFPNLL
VNGSAGIAVGMATNIPPHNLREVAAGAQWALEHPEATHEELQDALIERIKGPDFPSGALV
VGRKGIEEAYRTGRGSITMRAVVEVEEIQNRQCLVVTELPYQTNPDNLAQKIADLVKDGK
VGGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALVDGVPRT
LSIDAFIRHWVTHQIEVIVRRTKFRLRKAEERAHILRGLLKALDAIDEVIALIRRSNTVE
IAREGLMGLLEIDEIQANAILEMQLRRLAALERQKIVAEHDELQAKINEYNAILASEERQ
RSIVSEELAAIVEKFGDDRRSKLVPFDGDMSIEDLIAEEDIVVTITHGGYVKRTKTEDYR
SQKRGGKGVRGTKLKQDDLVDHFFVSTTHHWLLFFTNKGRVYRSKAYELPDAGRDARGQH
VANLLAFQPDEKIAQILAIRDYEAAPYLILATKGGLVKKTALKDYDSPRSGGVIAINLRE
TGADGADGAADELIGAELVSAEDDLLLISKKAQSIRFTATDDALRPMGRATSGVKGMSFR
EGDELLSMNVVRPGTFVFTATDGGYAKRTPVDEYRVQGRGGLGIKAAKIVEDRGSLVGAL
VVDESDEILAITLGGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGQEAD
EVEADENDTEVADGQAAEAAEGTQPSAGEHEE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaaccacccccaccgcagagaacgccgcggaggagcagcccgtgctgcgc
atcgagcccgtcgggctcgagacggagatgcagcgctcctacctcgactacgcgatgtcc
gtcatcgtctcgcgcgccctgccggacgtgcgcgacggcctcaagccggtgcaccgccgc
gtgctgtacgcgatgtacgacggcggctaccggcccgagaagggcttctacaagtgcgcc
cgcgtcgtcggcgacgtcatgggcacctaccacccgcacggtgacagctcgatctacgac
gccctggtccggctggcccagccgtggtcgatgcgcatgccgctggtggactccaacggc
aacttcggctctccgggcaacgacccggcggcagcgatgcgctacaccgagtgcaagctg
atgccgcaggccatggagatgctccgggacatcgacgaggagaccgtcgacttccaggac
aactacgacggccgcaaccaggagccgaccgtcctgccggcgcgcttcccgaacctgctg
gtcaacggcagcgccggtatcgcggtcggtatggcgacgaacatcccgccgcacaacctc
cgcgaggtcgcggccggcgcccagtgggcgctggagcacccggaggccacgcacgaggag
ctccaggacgcgctcatcgagcggatcaagggacccgacttcccgtcgggcgccctggtc
gtgggccgcaagggcatcgaggaggcgtaccggaccggtcgcggctccatcacgatgcgc
gcggtggtggaggtcgaggagatccagaaccgccagtgcctggtggtcacggagctcccg
taccagaccaaccccgacaacctcgcgcagaagatcgcggacctggtgaaggacggcaag
gtcggcggcatcgccgacgtccgtgacgagacctcgtcgcggaccggccagcgcctggtg
atcgtcctcaagcgcgacgccgtcgccaaggtcgtgctgaacaacctctacaagcacacc
gatctgcagaccaacttcggcgccaacatgctggcgctggtggacggcgtgccgcgcacg
ctgtcgatcgacgcgttcatccgccactgggtgacgcaccagatcgaggtcatcgtccgg
cgcacgaagttccgcctgcgcaaggcggaggagcgcgcccacatcctgcgcggtctgctc
aaggcgctggacgcgatcgacgaggtcatcgccctgatccggcgcagcaacacggtcgag
atcgcgcgcgagggcctgatgggcctcctggagatcgacgagatccaggcgaacgcgatc
ctcgagatgcagctccgccgcctggcggccctggagcggcagaagatcgtcgccgagcac
gacgagctccaggccaagatcaacgagtacaacgccatcctggcctcggaggagcgccag
cgctccatcgtcagcgaggaactggcggcgatcgtcgagaagttcggcgacgaccggcgt
tccaagctggtgcccttcgacggtgacatgtccatcgaggacctgatcgccgaagaggac
atcgtcgtcacgatcacgcacggcggctacgtcaagcgcaccaagaccgaggactaccgc
tcgcagaagcgcggcggcaagggcgtgcgcggcaccaagctgaagcaggacgacctggtc
gaccacttcttcgtctccaccacgcaccactggctgctcttcttcaccaacaagggccgg
gtctaccggtccaaggcgtacgagctgccggacgccggccgcgacgcccgcgggcagcac
gtggcgaacctgctggccttccagccggacgagaagatcgcccagatcctcgcgatccgc
gactacgaggcggcgccctacctgatcctggccaccaagggcggcctggtgaagaagacg
gcgctcaaggactacgactcgccccgttccggcggcgtcatcgcgatcaacctccgggag
accggagcggacggcgccgacggcgctgccgacgagctgatcggcgccgagctggtgtcc
gccgaggacgacctgctgctgatcagcaagaaggcgcagtcgatccgcttcacggccacc
gacgacgcgctgcgcccgatgggccgcgccacctcgggcgtgaagggcatgagtttccgt
gaaggtgacgaactgctctccatgaacgttgtgaggccgggtacgttcgtcttcaccgcg
accgacggcggctacgccaagcggacgccggtcgacgagtaccgcgtccagggccgtggc
ggtctgggtatcaaggccgccaagatcgtggaggaccgcggttcgctcgtcggggcgctc
gtggtcgacgagagcgacgagattctcgccatcacgctcggcggtggtgtgattcgcacg
cgcgtcaacgaagtcagggagaccggccgtgacaccatgggcgtccagctgatcaacctg
ggcaagcgcgatgccgtggtcggcatcgcccggaacgccgaggccggtcaggaagctgac
gaggtcgaggccgacgagaacgacaccgaggtggccgacggacaggccgccgaggccgcc
gagggcacgcagccctcggccggggagcacgaggagtaa
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