Streptomyces nojiriensis: JYK04_04871
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Entry
JYK04_04871 CDS
T07326
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_04871 (radA)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JYK04_04871 (radA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
ChlI
AAA_16
Lon_C
DnaB_C
AAA_22
nSTAND_NTPase5
AAA_14
nSTAND3
AAA
NACHT
ABC_tran
AAA_5
AAA_24
AAA_30
NTPase_1
DUF7129
PAXNEB
DAP3
AAA_29
Rad51
RsgA_GTPase
MCM
AAA_18
SLFN-g3_helicase
DUF8455
NB-ARC
RecA_N
TniB
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QTI47030
LinkDB
All DBs
Position
complement(5186084..5187496)
Genome browser
AA seq
470 aa
AA seq
DB search
MAARTARSSAKDRPSYRCTDCGWTTAKWLGRCPECQAWGTVEEMGAPAVRTTAAGRVSTA
ALPIAQVDGRTATARSTGVDELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASD
EHRTLYVTGEESASQVRLRADRINALNDHLYLAAETDLSAVLGHLDAVKPSLLVLDSVQT
VASPEIDGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGAIAGPRLLEHLVDVVL
SFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRAEAVPGTCLT
VTLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRITALGKRDIYS
ATVGGVKLTEPAADLAIALALASAASDVPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAH
RLGFTHALVPADPGKVPAGMKVIEVADMGDALRVLPRGRSRTPAKERSAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgcaccgctcgttcatccgccaaggaccggccgtcctaccgctgcaccgac
tgcggctggacgaccgcgaagtggctcggccgctgtcccgaatgccaggcctggggcacc
gtcgaggagatgggcgcacccgccgtgcggaccaccgccgccggccgggtctcgactgcc
gccctgccgatcgcgcaggtcgacggccggaccgcgaccgcccgcagcaccggcgtggac
gagctggaccgcgtcctcggcggcgggctcgtgcccggtgccgtcgtactgctcgccggc
gagcccggcgtcggcaagtcgaccctgctgctggacgtcgcggcgaaggcggccagcgac
gagcaccgcacgctgtacgtgaccggcgaggagtcggccagccaggtgcgcctgcgggcc
gaccggatcaacgccctcaacgatcacctctatctcgctgccgagaccgacctgtcggcc
gtcctcgggcatctcgacgccgtgaagccctccctgctggtcctggactccgtacagacc
gtcgcctcccccgagatcgacggcgcgcccggcggcatggcccaggtgcgcgaggtggcc
ggagcactgatccgggcctccaaggagcgcgggatggccaccctcctcgtcggccacgtg
accaaggacggggccatcgccggtccccgcctgctggagcacctcgtcgacgtggtgctg
agcttcgagggcgaccggcacgcccggctgcggctggtgcgcggcgtcaagaaccggtac
ggggccaccgacgaggtcggctgcttcgagctgcacgacgaggggatcaccgggctcgcc
gacccgagcggactgttcctgacccggcgggccgaggccgtgccgggcacctgcctgacg
gtgactctggaggggaagcgcccgctggtcgccgaggtgcaggcgctgaccgtggactcc
cagatcccctccccccggcggaccacctccggcctggagacctcgcgcgtgtcgatgatg
ctggcggtgctggagcagcgcggccggatcaccgcgctcggcaagcgcgacatctacagc
gccaccgtgggcggggtgaagctcaccgagccggccgccgacctggcgatcgcgctcgcg
ctggcctccgccgccagcgacgtcccgctgccgaagaacctcgtcgcgatcggtgaggtc
ggcctggccggcgaggtgcggcgggtgaccggcgtgcagcggcggctcgcggaggcgcac
cggctgggattcacacatgcgctcgtgccggcggatccggggaaggtgccggccgggatg
aaggtcatcgaggtggccgacatgggtgacgcgctacgggtgttgccgcgcggccgctcc
cgtacgccggccaaggagcgctccgcgcagtag
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