Streptomyces nojiriensis: JYK04_05220
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Entry
JYK04_05220 CDS
T07326
Symbol
gabR_2
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snf03000
]
JYK04_05220 (gabR_2)
Transcription factors [BR:
snf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JYK04_05220 (gabR_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_36
HTH_Crp_2
wHTH-PRTase_assc
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QTI47371
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Position
5540813..5542207
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AA seq
464 aa
AA seq
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MTDSWATFGADLHLDLTAGRGLRAGLTEALREAARSGRLAAGTRLPSSRTLAADLGIARN
TVAEAYAELVAEGWLTARQGSGTRVAERARPRRPAAAAPVRRPAREGPAYSLIPGSPDLG
GFPRAAWLSAARRALTDAPNEAFGYAADPRGRVELRQALAGYLARARGVYADPERIVLCA
GFLHGLALLAGVLRARRVREVAVEGYGLDFHRNLLVRAGLRTRPLGVDGAGARTGELTAS
AGAVLLTPAHQFPTGVALTPARRAAAVDWARTTGGLILEDDYDGEFRYDRQPVGALQGLD
PDRVVYLGTASKSLAPGLRMGWMVVPPGLLEEVLEAKRPTDWACGALDQLTLAEFITSGA
YDRHVRGMRLRYRRRRDELVAAVGDRVGVSGIAAGLHAVLDLPEGLERSVLQSAAWQDLA
LHGLGRFRHPESGLPWRDALVVGYGTPSDSAWGPTLAALSAALP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacggattcatgggccactttcggtgccgacctgcacctggacctcaccgccggacgc
ggcctgcgggccgggctcaccgaggccctgcgcgaggccgcgcgcagtgggcggctggcg
gccgggacccggctgccgtcctcccgcaccctcgccgccgacctgggcatcgcccggaac
acggtcgccgaggcgtacgccgagctcgtcgccgagggctggctgacggcccgccagggc
tccggtacccgcgtcgccgaacgggcccgaccgcgccggcccgcggccgccgcccccgta
cggcgccccgcgcgcgaggggcccgcgtacagcctgatccccggctccccggacctgggc
ggcttcccgcgcgcggcctggctgtcggcggcccggcgggcgctgaccgacgcgccgaac
gaggccttcgggtacgcggccgacccgcgcggccgcgtcgagctgcggcaggcgctggcc
ggatacctggcgcgggcgcgcggggtgtacgccgaccccgaacggatcgtgctgtgcgcg
ggcttcctgcacgggctggcgctgctggcgggcgtactgcgggcgcggcgggtgcgggag
gtggcggtggagggctacggcctggacttccaccggaacctgctggtgcgggcggggctg
cggacgcgcccgctgggcgtggacggggcgggggcccggacgggggagctgaccgcgtcg
gcgggcgcggtgctgctgaccccggcgcaccagttcccgacgggcgtcgccctgaccccg
gcccggcgggcggcggcggtcgactgggcccggaccacgggcgggctgatcctggaggac
gactacgacggggagttccgctacgaccgccagccggtcggcgcgctgcagggactggac
ccggaccgggtggtgtacctcgggacggccagcaagtcactggcgccggggctgcggatg
ggctggatggtggtcccgccggggctgctggaggaggtgctcgaggccaagcggcccacg
gactgggcgtgcggcgcgctggatcagctgacgctggcggagttcatcacctccggggcg
tacgaccggcacgtgcgcgggatgcggctgcggtaccggcggcgccgggacgagctggtg
gcggcggtgggggaccgggtgggcgtgtcggggatcgcggcggggctgcacgcggtgctg
gacctcccggagggactggagcggtcggtcctgcagtcggcggcctggcaggaccttgcc
ctgcacgggctggggcggttccggcatccggagtccggactgccgtggcgcgacgcgctg
gtcgtcggctacgggactccgtcggacagcgcgtgggggccgacgctggcggccctgtcg
gcggcgctcccgtga
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