Streptomyces nojiriensis: JYK04_05243
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Entry
JYK04_05243 CDS
T07326
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00020
Citrate cycle (TCA cycle)
snf00190
Oxidative phosphorylation
snf00650
Butanoate metabolism
snf00720
Other carbon fixation pathways
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
Module
snf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYK04_05243 (sdhB)
00650 Butanoate metabolism
JYK04_05243 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
JYK04_05243 (sdhB)
00720 Other carbon fixation pathways
JYK04_05243 (sdhB)
Enzymes [BR:
snf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JYK04_05243 (sdhB)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4
Fer4_18
Fer4_4
Fer4_2
Fer4_6
Fer4_21
Fer4_3
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
QTI47394
LinkDB
All DBs
Position
complement(5563374..5564132)
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AA seq
252 aa
AA seq
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MATPTLDKMEAAAAASPFITVTFRIRRFNPEISEESTWQDFQVEIDPKERVLDGLHKIKW
DLDGTLTFRRSCAHGICGSDAMRINGKNRLACKTLIKDINPEKPITVEAIKGLTVMKDLV
VDMEPFFQAYRDVMPFLVTKGNEPTRERLQSAEDRERFDDTTKCILCAACTSSCPVFWND
GQYFGPAAIVNAHRFIFDSRDEAGEQRLEILNDKDGVWRCRTTFNCTDACPRGIEVTKAI
QEVKRALITRRF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccacccccaccctggacaagatggaggcggcggccgccgcctcgccgttcatcacg
gtcaccttccggatccgccgcttcaacccggagatctccgaggagtcgacctggcaggac
ttccaggtcgagatcgacccgaaggagcgcgtgctcgacggtctccacaagatcaagtgg
gacctcgacggcacgctgaccttccgccgctcgtgcgcgcacggcatctgcggctccgac
gcgatgcggatcaacggcaagaacaggctcgcctgcaagacgctgatcaaggacatcaac
ccggagaagccgatcaccgtcgaggccatcaagggcctcacggtgatgaaggaccttgtc
gtcgacatggagcccttcttccaggcgtaccgcgacgtcatgccgttcctggtcaccaag
ggcaacgagccgacgcgcgagcgtctgcagtccgccgaggaccgcgagcgcttcgacgac
accaccaagtgcatcctgtgcgccgcgtgcacgtcctcgtgcccggtgttctggaacgac
ggccagtacttcggcccggcggcgatcgtcaacgcgcaccgcttcatcttcgactcgcgt
gacgaggccggcgagcagcggctggagatcctgaacgacaaggacggcgtgtggcgctgc
cgcacgaccttcaactgcaccgacgcgtgcccgcgtggcatcgaggtcacgaaggcgatc
caggaagtcaagcgtgcgctgatcacgcgccgcttctag
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