Streptomyces nojiriensis: JYK04_05244
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Entry
JYK04_05244 CDS
T07326
Symbol
sdhA_1
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00020
Citrate cycle (TCA cycle)
snf00190
Oxidative phosphorylation
snf00650
Butanoate metabolism
snf00720
Other carbon fixation pathways
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
Module
snf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYK04_05244 (sdhA_1)
00650 Butanoate metabolism
JYK04_05244 (sdhA_1)
09102 Energy metabolism
00190 Oxidative phosphorylation
JYK04_05244 (sdhA_1)
00720 Other carbon fixation pathways
JYK04_05244 (sdhA_1)
Enzymes [BR:
snf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JYK04_05244 (sdhA_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
DUF1978
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QTI47395
LinkDB
All DBs
Position
complement(5564132..5565886)
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AA seq
584 aa
AA seq
DB search
MKIHKYDTVIVGAGGAGMRAAIESTKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVLDLEKMGLPFNRTPDGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKEGVEFFNEFYVLDQLLVEEDGVKKSAGV
VAYELATGEIHVFQAKAVIYASGGTGKFFKVTSNAHTLTGDGQAACYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPAGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYAMGGIP
TNVEGEVLSDNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRSGIAAAKYSQE
NDYVELPENPAQQVADLVEHLRNSTGNERVAELRLELQETMDACVMVFRTEQTIKTAVEK
IAELRERYKNVSVQDKGKRFNTDLLEAIELGNLLDLAEVMAVSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGADGKDSVRLDYKPVVVTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgcgggcggcgcgggcatgcgcgcc
gccatcgagtcgacgaagcgcagccgcaccgccgtgctgacgaagctctaccccacccgc
tcccacacgggcgccgcgcagggcggcatggccgccgcgctggccaacgtggaagaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgccgagatcctggcgaaggaggccatcgacgcggtcctcgacctggagaagatgggc
ctgccgttcaaccgcaccccggacggcaccatcgaccagcgccgcttcggcggtcactcg
cgcaaccacggcgaggccccggtccgccggtcctgctacgccgcggaccgcaccggtcac
atgatcctccagacgctgtaccagaactgcgtcaaggagggcgtggagttcttcaacgag
ttctacgtcctcgaccagctcctcgtcgaggaggacggcgtcaagaagtcggccggtgtg
gtcgcgtacgagctcgccaccggcgagatccacgtgttccaggccaaggccgtcatctac
gcctccggcggcaccggcaagttcttcaaggtgacctccaacgcgcacaccctcacgggt
gacggccaggcggcctgctaccgccgcggcctgccgctggaggacatggagttcttccag
ttccacccgacgggcatctggcgcatgggcatcctgctgacggagggcgcccgcggtgag
ggcggcatcctccgcaacaaggacggcgagcgcttcatggagaagtacgcgccggtcatg
aaggacctcgcgtcccgtgacgtcgtctcgcgctccatctacaccgagatccgcgagggc
cgcggctgcggcccggccggtgaccacgtgtacctggacctgacgcacctgccgccggag
cagctcgacgcgaagctcccggacatcaccgagttcgcgcgcacctacctgggcatcgag
ccgtacacggacccgatcccgatccagcccaccgcgcactacgccatgggcggcatcccg
accaacgtcgagggtgaggtcctcagcgacaacaccaccgtcgtcccgggcctctacgcg
gccggcgaggtcgcgtgcgtgtcggtgcacggcgcgaaccgcctcggcaccaactcgctg
ctggacatcaacgtcttcggcaagcgctccggcatcgccgccgccaagtactcccaggag
aacgactacgtcgagctcccggagaacccggcgcagcaggtcgccgacctcgtcgagcac
ctgcgcaactccacgggcaacgagcgggtcgccgaactgcgtctggagctccaggagacg
atggacgcgtgcgtgatggtgttccgtacggagcagaccatcaagaccgcggtcgagaag
atcgcggagctgcgcgagcgctacaagaacgtgtccgtccaggacaagggcaagcgcttc
aacacggacctgctggaggccatcgagctgggcaacctgctcgacctggccgaggtcatg
gccgtgtccgcgctggcgcgcaaggagtcccgcggcggtcactaccgcgaggactacccg
aaccgcgacgacgtcaacttcatgcgccacaccatggcgtaccgcgaggtcggcgccgac
ggcaaggattccgtccgcctggactacaagcccgtcgtcgtcacccgctaccagccgatg
gagcgtaagtactga
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