Streptomyces nojiriensis: JYK04_05418
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Entry
JYK04_05418 CDS
T07326
Symbol
fumB
Name
(GenBank) Fumarate hydratase class I, anaerobic
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00020
Citrate cycle (TCA cycle)
snf00620
Pyruvate metabolism
snf00720
Other carbon fixation pathways
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
Module
snf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYK04_05418 (fumB)
00620 Pyruvate metabolism
JYK04_05418 (fumB)
09102 Energy metabolism
00720 Other carbon fixation pathways
JYK04_05418 (fumB)
Enzymes [BR:
snf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
JYK04_05418 (fumB)
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Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
LCM
Motif
Other DBs
NCBI-ProteinID:
QTI47569
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Position
complement(5748415..5750094)
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AA seq
559 aa
AA seq
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MTAVMPEFAYTDLLPLGEDTTPYRLVTAEGVSTFEADGRTFLKVEPEALRKLAEEAIHDI
QHFLRPAHLAQLRRIIDDPEASSNDKFVALDLLKNANIAAAGVLPMCQDTGTAIVMGKRG
QNVLTEGGDEAALSRGIYDAYTRLNLRYSQMAPLTMWEEKNTGSNLPAQIELYATDGGAY
KFLFMAKGGGSANKSFLYQETKAVLNEASMMKFLEEKIRSLGTAACPPYHLAIVVGGTSA
EHALKTAKYASAHYLDELPREGSALGHGFRDEALEQQVFELTQKIGIGAQFGGKYFCHDV
RVVRLPRHGASLPVAIAVSCSADRQATAKITAEGVFLEQLERDPARFLPETTDEHLNDAA
DVVKIDLNQPMDDILATLTQHPVKTRLSLTGPLVVARDIAHAKIKELLDSGAEMPQYLKD
HPVYYAGPAKTPEGYASGSFGPTTAGRMDSYVEQFQAAGGSKVMLAKGNRSQQVTDACGR
HGGFYLGSIGGPAARLAQDCIKKVEVLEYEELGMEAVWKIEVEDFPAFIVVDDKGNDFFQ
NPAPEPTFTHIPVRGPGLA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgtcatgccagagtttgcgtacaccgacctgctgcccctgggcgaggacacc
accccgtaccggctggtgaccgccgagggcgtgtccaccttcgaggcggacggccgtacg
ttcctcaaggtcgagccggaggcgctgcgcaagctcgccgaagaggccatccacgacatc
cagcacttcctgcgccccgcgcacctcgcgcagctgcgccgcatcatcgacgaccccgag
gcctcctcgaacgacaagttcgtcgcgctcgacctcctgaagaacgcgaacatcgcggcg
gccggcgtcctgccgatgtgccaggacacgggcacggcgatcgtcatgggcaagcgcggc
cagaacgtcctcaccgagggcggtgacgaggcggcgctctcccgcggcatctacgacgcg
tacacccgtctgaacctgcgctactcgcagatggcccccctcaccatgtgggaggagaag
aacaccggctcgaacctgcccgcgcagatcgagctgtacgcgaccgacggcggcgcgtac
aagttcctcttcatggccaagggcggcggctcggccaacaagtcgttcctctaccaggag
accaaggcggtcctcaacgaggcctccatgatgaagttcctggaggagaagatccgctcg
ctcggtacggcggcctgcccgccctaccacctggcgatcgtggtcggcggcacctccgcc
gagcacgcgctgaagaccgccaagtacgcctcggcgcactacctggacgagctgccccgc
gagggctccgcgctgggccacggcttccgcgacgaggccctggagcagcaggtcttcgag
ctgacccagaagatcggcatcggcgcgcagttcggcggcaagtacttctgccacgacgtc
cgcgtcgtgcgcctcccccggcacggcgcgtccctgccggtcgccatcgccgtgtcctgc
tcggcggaccgccaggccaccgcgaagatcaccgccgagggcgtcttcctggagcagctg
gagcgcgacccggcccgcttcctgccggagaccacggacgagcacctgaacgacgcggcg
gacgtcgtcaagatcgacctgaaccagccgatggacgacatcctggcgaccctcacgcag
cacccggtcaaaacccgcctgtccctcaccggcccgctggtcgtggcgcgcgacatcgcg
cacgccaagatcaaggaactgctggactcgggcgcggagatgccccagtacctgaaggac
cacccggtctactacgccggtcccgcgaagacccccgagggctacgcatcgggctccttc
ggcccgaccacggccggccgcatggactcctacgtcgagcagttccaggcggcgggcggc
tccaaggtcatgctggccaagggcaaccgctcccagcaggtgacggacgcgtgcggccgg
cacggcggcttctacctgggctcgatcggcggcccggcggcgcgcctggcccaggactgc
atcaagaaggtcgaggtcctggagtacgaggagctcggcatggaggcggtctggaagatc
gaggtcgaggacttcccggccttcatcgtggtcgacgacaagggcaacgacttcttccag
aacccggccccggagccgacgttcacccacatcccggtgcgcggacccggcctggcatag
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