Streptomyces nojiriensis: JYK04_05471
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Entry
JYK04_05471 CDS
T07326
Symbol
oppF_1
Name
(GenBank) Oligopeptide transport ATP-binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
snf
Streptomyces nojiriensis
Pathway
snf01501
beta-Lactam resistance
snf02010
ABC transporters
snf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYK04_05471 (oppF_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYK04_05471 (oppF_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYK04_05471 (oppF_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snf02000
]
JYK04_05471 (oppF_1)
Transporters [BR:
snf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JYK04_05471 (oppF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_13
SMC_N
AAA_22
ATP-synt_ab
AAA_16
AAA_18
PRK
nSTAND3
RsgA_GTPase
AAA
Rad17
Sigma54_activat
DUF87
RNA_helicase
Sigma54_activ_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QTI47622
LinkDB
All DBs
Position
5806931..5807983
Genome browser
AA seq
350 aa
AA seq
DB search
MAELSKTTTEREPILQVRNLVKHFPLTQGILFKKQVGAVKAVDGISFDLYRGETLGIVGE
SGCGKSTVAKLLMNLERATAGEVFYKGQDITKLSGRALKAVRRNIQMVFQDPYTSLNPRM
TVGDIIGETFEIHPEVAPKGDRRRKVQELLDVVGLNPEYINRYPHQFSGGQRQRIGIARG
LALNPEIIICDEPVSALDVSVQAQVINLMEKLQDEFNLSYLFIAHDLSIVRHISDRVGVM
YLGKMAEIGSDAEIYEHPTHPYTQALLSAVPVPDPEAREGRERIILTGDVPSPANPPSGC
RFRTRCWKAQDKCSTEEPLLAIPERFKGVNTLAAHESACHFAEEKAILAV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcagcaagacgaccaccgagcgcgagccgatcctccaggtccgtaacctg
gtcaagcacttcccgctgacccagggcattctgttcaagaagcaggtcggtgcggtcaag
gccgtcgacgggatctccttcgacctgtaccggggcgagaccctcggcatcgtgggcgag
tccggctgtggcaagtccacggtcgccaagctcctgatgaacctggagcgggccaccgcc
ggcgaggtcttctacaagggccaggacatcaccaagctgtccggccgcgcgctgaaggcc
gtccgccgcaacatccagatggtgttccaggacccgtacacctcgctgaacccgcgcatg
acggtcggcgacatcatcggggagaccttcgagatccaccccgaggtggccccgaagggc
gaccggcgccgcaaggtccaggagctcctggacgtcgtgggcctgaacccggagtacatc
aaccggtacccgcaccagttctccggcggtcagcgccagcgcatcggcatcgcccgcggc
ctcgcgctcaacccggagatcatcatctgcgacgagccggtctccgcgctcgacgtgtcg
gtgcaggcccaggtcatcaacctgatggagaagctgcaggacgagttcaacctctcctac
ctcttcatcgcgcacgacctctcgatcgtccggcacatctcggaccgcgtgggcgtcatg
tacctgggcaagatggccgagatcggctccgacgccgagatctacgagcacccgacccac
ccgtacacccaggcgctgctctccgccgtcccggtcccggacccggaggcgcgcgagggc
cgcgagcggatcatcctcaccggtgacgtcccgtccccggccaacccgccgtcgggctgc
cgcttccgcacccgctgctggaaggcccaggacaagtgctccaccgaggagccgctgctg
gcgatcccggagcgcttcaagggcgtgaacaccctggccgcgcacgagtccgcgtgccac
ttcgccgaggagaaggccatcctggccgtctga
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