Streptomyces nojiriensis: JYK04_05518
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Entry
JYK04_05518 CDS
T07326
Symbol
cshA
Name
(GenBank) ATP-dependent RNA helicase CshA
Organism
snf
Streptomyces nojiriensis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QTI47669
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Position
complement(5850168..5852225)
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AA seq
685 aa
AA seq
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MSPFPIQEMTLPVALSGTDVIGQAKTGTGKTLGFGLPLLERVVVPADVEAGRATPAQLTD
APQALVVVPTRELCTQVTNDLLTAGKVRNVRVLAIYGGRAYEPQVEALKKGVDVIVGTPG
RLLDLAGQKKLDLSHVKALVLDEADEMLDLGFLPDVEKIMSYLPAKRQTMLFSATMPGAV
IGLARRYMTQPTHIRAVSEDGEGATVANITQHVFRAHNMDKPELVSRILQAEGRGLAMIF
CRTKRTAADIAEQLEKRGFASGAVHGDLGQGAREQALRAFRNGKVDVLVCTDVAARGIDV
EGVTHVINYQTPEDEKTFLHRVGRTGRAGNKGIAVTLVDWDDIPRWQLINKALELDFHDP
VETYSTSPHLFEQLNIPAGTKGILPRAERTRAGLKAENLEDLGETGGRGGRGGRSGPAAA
AVVTEERPARTRTPRQRRRTRGGTELAEGAEATAPVTPVQAPEAPAAPAADEPRRPRRRR
TRVAAVPAQAAVAAPVAEAPAVQAPAAPAPVVEAPAAPVTPVAEEAPARPKRVPTRKATA
AAAVTPVAEVPAEEAPARPKRVRTRKVTPAEPEPDFQMPPLVEPVRARRTTRKAAPAAAV
TPVAEAPAEDAPVKPKRTRTRKVAEAAPVAEAAAVAEEAPVKPKRTRTRKVAEAAPVAEA
AAVAEEAPVKPKRTRTRKVAAAPEA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccccttcccgatccaggagatgaccctccccgtcgccctttccggcacggacgtc
atcggccaggccaagaccggaaccggcaagacgctcggtttcggccttccgctgctggag
cgggtcgtcgtcccggcggacgtcgaggccggccgcgccaccccggcgcagctgaccgac
gctccgcaggccctcgtggtggttccgacccgcgagctgtgcacccaggtcaccaacgac
ctcctgaccgcgggcaaggtccgcaacgtccgcgtcctcgccatatacggcggccgcgcg
tacgagccccaggtcgaggcgctcaagaagggcgtcgacgtgatcgtcggcaccccgggc
cgcctgctcgacctggccgggcagaagaagctcgacctctcgcacgtcaaggccctcgtc
ctggacgaggccgacgagatgctcgacctgggcttcctgcccgacgtcgagaagatcatg
tcgtacctgcccgcgaagcgtcagacgatgctgttctcggcgaccatgccgggtgcggtc
atcggtctggcccgccggtacatgacgcagccgacccacatccgcgccgtctccgaggac
ggcgagggcgcgaccgtcgccaacatcacgcagcacgtcttccgtgcgcacaacatggac
aagccggagctcgtctcccgcatcctgcaggccgagggccgcggcctggccatgatcttc
tgtcgtaccaagcgcacggcggccgacatcgccgagcagctggagaagcgcggcttcgcg
tccggcgccgtccacggcgacctgggccagggtgcgcgcgagcaggcgctgcgcgcgttc
cgcaacggcaaggtcgacgtgctggtgtgcaccgacgtcgccgcgcgcggcatcgatgtc
gagggtgtgacccacgtcatcaactaccagacgccggaggacgagaagaccttcctgcac
cgtgtgggccgcaccggccgcgcgggcaacaagggcatcgccgtcaccctggtcgactgg
gacgacatcccgcgctggcagctgatcaacaaggcgctggagctggacttccacgacccg
gtggagacgtactccacgtcgccgcacctgttcgagcagctgaacatcccggccggtacc
aagggcatcctgccgcgcgccgagcgcacgcgggccggcctgaaggccgagaacctggag
gacctgggcgagaccggcggccgcggtggccgtggcggccgctccggtccggcggccgcc
gccgtggtgaccgaggagcgtccggcccggacccgtacgccgcgccagcgccgccgtacg
cggggcgggacggagctcgccgagggcgccgaggccaccgcgccggtgaccccggtccag
gctcccgaggcccccgcggccccggccgccgacgagccgcgccgtccgcgccgccgccgc
acccgtgtggccgcggtcccggcccaggccgccgtggccgctccggtcgccgaggctccg
gccgtccaggctccggccgccccggcccctgtcgtcgaggctccggccgctccggtgacc
ccggtcgccgaggaggctccggcccgcccgaagcgcgtcccgacccgcaaggccaccgcg
gccgccgcggtgaccccggtcgccgaggtccccgccgaggaggccccggcccggccgaag
cgcgtccgtacccgcaaggtcaccccggccgagccggagccggacttccagatgccgccg
ctggtcgagcccgtccgggcccggcgcaccacccgcaaggcagccccggccgccgcggtg
accccggtcgccgaggctcccgccgaggacgctccggtcaagccgaagcggacccgcacc
cgcaaggtcgcggaagccgcaccggtcgccgaggccgccgcggtggcggaggaggctccg
gtcaagccgaagcgcacccgcacccgcaaggtcgcggaagccgcaccggtcgccgaggcc
gccgccgtggccgaggaggccccggtcaagccgaagcgcacccgcacccgcaaggtcgcg
gccgcgccggaggcgtaa
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