Streptomyces nojiriensis: JYK04_05734
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Entry
JYK04_05734 CDS
T07326
Symbol
lysA_4
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00300
Lysine biosynthesis
snf00470
D-Amino acid metabolism
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01230
Biosynthesis of amino acids
Module
snf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYK04_05734 (lysA_4)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYK04_05734 (lysA_4)
Enzymes [BR:
snf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JYK04_05734 (lysA_4)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTI47881
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Position
6082519..6083910
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSPPPADLNALDEKVWARTVERTADGVVAVGGIEVTRLAE
EFGTPAYFLDEEDFRSRCRAWAHAFGPDADVFYAGKAFLSKAVVKWLKEEGLNVDVCSGG
ELTTALAAGMPAARIAFHGNNKSEGEIRRAVEAGVGRIVLDSFQEIARVAHIARELGVRQ
PVQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGVHSHIGS
QIFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSNDDPREPHEIAKALH
EIVARECESAGLRAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSISLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGA
YCRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLRLDLG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcgcaccccgccgggccccgccacgccgacgtcctgcccgaggggcac
tactccccgccgcccgccgacctgaacgcgctcgacgagaaggtctgggcccggaccgtc
gagcgtacggccgacggggtcgtcgccgtgggcggcatcgaagtgacccggctcgccgag
gagttcgggacccccgcctacttcctcgacgaggaggacttccggtcccggtgccgggcc
tgggcgcacgccttcggtcccgacgccgacgtgttctacgccggcaaggcgttcctctcc
aaggccgtcgtgaagtggctgaaggaggaggggctgaacgtcgacgtgtgctccggtggg
gagctgaccaccgcgctcgccgccgggatgcccgccgcgcggatcgccttccacgggaac
aacaagtccgagggcgagatccgccgggccgtcgaggccggggtcgggcgcatcgtgctc
gactccttccaggagatcgcccgcgtcgcgcacatcgcccgtgagctgggcgtacgccag
cccgtccagatccgcgtgacggtcggcgtcgaggcgcacacccacgagttcatcgcgacc
gcgcacgaggaccagaagttcggcatcgcggtggccgacgggtccgccgccgaagccgtg
cgccgggcgctcgggcacgactcgctggagctgctcggcgtccactcccacatcggttcg
cagatcttcgacatggccggcttcgaggtctccgccaagcgcgtcgtgcggctgctggcc
gccgtacgggacgagcacggggtggagctgcccgagatcgacctgggcggtggcctcggc
atcgcgtacacctcgaacgacgacccgcgcgagccccacgagatcgccaaggccctgcac
gagatcgtggcccgggagtgcgagagcgccggactgcgggcgccgcggatctccgtcgag
cccggccgcgccatcgtcggcccgaccgccttcaccctgtacgaggtggggaccatcaag
ccgctggaggggctccgtacctacgtgagcgtcgacggcgggatgtccgacaacatccgc
accgccctctacgacgccgagtactccatctcactcgtctcccgcacctccgacgccgag
cccatgctcgtgcgcgtcgtcggcaagcactgcgagagcggcgacatcgtcgtgaaggac
gcgttcctgcccgccgacctcgcgcccggcgacctcctggccgtcccggccaccggcgcg
tactgccgctccatggccagcaactacaaccacgctctgcgcccgcccgtcgtcgccgtg
cgcgacggacaggcccgagtgatcgtccgccgcgagacggaggaagatctcctgcgcctc
gacctcggatga
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