Streptomyces nojiriensis: JYK04_05976
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Entry
JYK04_05976 CDS
T07326
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snf03019
]
JYK04_05976 (rnc)
03009 Ribosome biogenesis [BR:
snf03009
]
JYK04_05976 (rnc)
03036 Chromosome and associated proteins [BR:
snf03036
]
JYK04_05976 (rnc)
Enzymes [BR:
snf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JYK04_05976 (rnc)
Messenger RNA biogenesis [BR:
snf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYK04_05976 (rnc)
Ribosome biogenesis [BR:
snf03009
]
Eukaryotic type
90S particles
RNase
JYK04_05976 (rnc)
Prokaryotic type
rRNA processing factors
JYK04_05976 (rnc)
Chromosome and associated proteins [BR:
snf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JYK04_05976 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QTI48116
LinkDB
All DBs
Position
6356372..6357220
Genome browser
AA seq
282 aa
AA seq
DB search
MSELSNAEKQADSNNAASSHTLLEGRLGYQLESALLVRALTHRSYAYENGGLPTNERLEF
LGDSVLGLVVTDTLYTTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEG
TGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLDWKTSLQE
LTAAEGLGVPEYLVSETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRGIR
AAADERTAAAAAAATAGPAGVPASAGTENGGVPTPADSAPDA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagctgtccaacgctgagaagcaggcagacagtaacaacgcggcctcgtcccac
acgcttctggaagggcggctcgggtatcaactcgagtccgcccttctggtgcgtgcgctg
acccaccgctcgtacgcgtacgagaacggcggtctgcccaccaacgaacgcctggagttc
ctcggggactccgtgctgggcctggtggtcacggacacgctgtacacgacccacccggat
ctccccgaaggccagctggccaagcttcgggccgcggtggtcaactcgcgcgcactggcg
gaggtcggacgcggcctcgaactcggctccttcatccggctcggccggggcgaagagggc
acgggaggccgggacaaggcctccatcctcgccgacaccctggaagcggtgatcggcgcg
gtttacctcgatcagggcctcgacgcggcctcggagctggtccaccggctcttcgacccg
ctcatcgagaagtcctcgaacctcggggccggcctggactggaagaccagtctccaggaa
ctcacggcggccgaaggccttggcgtgcccgagtacctggtctccgagaccggtccggac
cacgagaagaccttcactgctgccgctcgcgtcggtggtgtctcgtacggcaccggcacc
ggccgcagcaagaaggaagcggaacagcaggccgcggagtccgcatggcgcggaatccgt
gccgccgcggacgagcggaccgcagccgcggcagccgccgcgactgccggtccggccggg
gttccggcttcggccgggaccgagaacggcggggtgccgacgcccgccgactcggcgccg
gacgcctga
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