KEGG   Streptomyces nojiriensis: JYK04_06472
Entry
JYK04_06472       CDS       T07326                                 
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
snf  Streptomyces nojiriensis
Pathway
snf00010  Glycolysis / Gluconeogenesis
snf00020  Citrate cycle (TCA cycle)
snf00260  Glycine, serine and threonine metabolism
snf00280  Valine, leucine and isoleucine degradation
snf00310  Lysine degradation
snf00380  Tryptophan metabolism
snf00620  Pyruvate metabolism
snf00630  Glyoxylate and dicarboxylate metabolism
snf00640  Propanoate metabolism
snf00670  One carbon pool by folate
snf00785  Lipoic acid metabolism
snf01100  Metabolic pathways
snf01110  Biosynthesis of secondary metabolites
snf01120  Microbial metabolism in diverse environments
snf01200  Carbon metabolism
snf01210  2-Oxocarboxylic acid metabolism
snf01240  Biosynthesis of cofactors
Module
snf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
snf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
snf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:snf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JYK04_06472 (lpd)
   00020 Citrate cycle (TCA cycle)
    JYK04_06472 (lpd)
   00620 Pyruvate metabolism
    JYK04_06472 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    JYK04_06472 (lpd)
   00640 Propanoate metabolism
    JYK04_06472 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JYK04_06472 (lpd)
   00280 Valine, leucine and isoleucine degradation
    JYK04_06472 (lpd)
   00310 Lysine degradation
    JYK04_06472 (lpd)
   00380 Tryptophan metabolism
    JYK04_06472 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JYK04_06472 (lpd)
   00670 One carbon pool by folate
    JYK04_06472 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snf04147]
    JYK04_06472 (lpd)
Enzymes [BR:snf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JYK04_06472 (lpd)
Exosome [BR:snf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JYK04_06472 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 DAO AlaDh_PNT_C HI0933_like Lys_Orn_oxgnase FAD_binding_2 NAD_binding_8 FAD_binding_3 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: QTI48607
LinkDB
Position
complement(6940583..6941995)
AA seq 470 aa
MSDDSTVDVIVIGGGTGGYSTALRASALGLSVLLAERDKVGGTCLHRGCIPSKAMLHAAE
LVDGIAEARERWGVRASVESVDWSALTATRDDIVSRNHKGVEGHLEHAGVRVVRSGARLT
GPRSVRTGDGREFTAARGIVLATGSRPRILPGLEPDGHTVVTSDDALFAPGLPASVLVLG
GGAIGVEYASFHRSMGAEVTLVEAADRLVPLEDADVSRHLARGLKKRGIDVQTGARLEGA
ERLASGGVRATVRTARGELREIGAQRLLVAVGRVPVTDGLDLAAAGLATDGRGFVAPADW
SRLETAVPGIHVVGDLLPPPSLGLAHASFAEGLLVAETLAGVASAPVDYAAVPRVTYSAP
QTAAVGLTEAQAREAAYDVVVNTMPLTAVAKGMVHGQGGTVKVVAERDGRVLGVHLVGPH
VSEMIAESQLIVGWDAEPGDVARHVHAHPTLSEAVGEAFLSLAGRGLHQQ
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagcgacgacagcacagtggatgtgatcgtgatcggcggcggcacgggcggctacagc
accgccctgcgcgcctcggccctgggcctgagcgtcctgctcgcggaacgcgacaaggtc
ggcgggacatgcctgcaccggggctgcatccccagcaaggccatgctgcacgcggcggaa
ctcgtcgacggcatagccgaggcgcgcgagcgctggggggtccgggcgagcgtggagtcg
gtcgactggtcggccctgaccgccacccgcgacgacatcgtctcccgcaaccacaagggc
gtggaagggcacttggaacacgcgggggtgcgggtggtgcgcagcggcgcccggttgacc
ggaccgcggtccgtacggaccggggacgggcgggagttcaccgccgcccggggcatcgtg
ctggccaccgggtcccggccgcgcatcctgccgggcctcgagcccgacggccacacggtg
gtgaccagtgacgacgcgctgttcgcacccggcctgccggcttcggtgctggtgctgggc
ggcggggcgatcggggtggagtacgcgtccttccaccgttccatgggcgccgaggtgacc
ctggtcgaggccgcggaccggctggtcccgctggaggacgcggacgtgtcccggcatctg
gcgcggggcctgaagaagcgcgggatcgacgtgcagaccggggcccggctggagggggcc
gagcggctcgcctccggcggggtccgggccaccgtgcgcaccgcgcggggggagctgcgg
gagatcggggcgcagcgcctgctggtggcggtcgggcgggtcccggtgaccgacgggctg
gacctcgcggcggccggactggcgaccgacggacgggggttcgtggccccggccgactgg
tcccggctggagaccgccgtcccggggatccacgtggtgggcgacctgctgccgccgccc
tcgctcgggctggcgcacgcctccttcgcggagggcctgctggtcgcggagaccctggcc
ggggtggcgagcgcgccggtggactacgcggcggtgccgcgggtgacctactcggccccg
cagaccgccgcggtcgggctgacggaggcacaggcgcgcgaggcggcgtacgacgtggtg
gtgaacacgatgccgctgaccgccgtggccaagggcatggtgcacgggcagggcggcacg
gtgaaggtggtggcggagcgggacgggcgggtgctgggcgtacacctggtggggccgcac
gtgtcggagatgatcgcggagagccagctgatcgtgggctgggacgcggaaccgggcgat
gtggcacggcacgtccacgcccacccgacgctgtcggaggcggtcggtgaggccttcctc
agcctggcgggccgcggcctgcaccagcagtag

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