Streptomyces nojiriensis: JYK04_06472
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Entry
JYK04_06472 CDS
T07326
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00010
Glycolysis / Gluconeogenesis
snf00020
Citrate cycle (TCA cycle)
snf00260
Glycine, serine and threonine metabolism
snf00280
Valine, leucine and isoleucine degradation
snf00310
Lysine degradation
snf00380
Tryptophan metabolism
snf00620
Pyruvate metabolism
snf00630
Glyoxylate and dicarboxylate metabolism
snf00640
Propanoate metabolism
snf00670
One carbon pool by folate
snf00785
Lipoic acid metabolism
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
snf01210
2-Oxocarboxylic acid metabolism
snf01240
Biosynthesis of cofactors
Module
snf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
snf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JYK04_06472 (lpd)
00020 Citrate cycle (TCA cycle)
JYK04_06472 (lpd)
00620 Pyruvate metabolism
JYK04_06472 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
JYK04_06472 (lpd)
00640 Propanoate metabolism
JYK04_06472 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JYK04_06472 (lpd)
00280 Valine, leucine and isoleucine degradation
JYK04_06472 (lpd)
00310 Lysine degradation
JYK04_06472 (lpd)
00380 Tryptophan metabolism
JYK04_06472 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JYK04_06472 (lpd)
00670 One carbon pool by folate
JYK04_06472 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snf04147
]
JYK04_06472 (lpd)
Enzymes [BR:
snf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JYK04_06472 (lpd)
Exosome [BR:
snf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JYK04_06472 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
DAO
AlaDh_PNT_C
HI0933_like
Lys_Orn_oxgnase
FAD_binding_2
NAD_binding_8
FAD_binding_3
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QTI48607
LinkDB
All DBs
Position
complement(6940583..6941995)
Genome browser
AA seq
470 aa
AA seq
DB search
MSDDSTVDVIVIGGGTGGYSTALRASALGLSVLLAERDKVGGTCLHRGCIPSKAMLHAAE
LVDGIAEARERWGVRASVESVDWSALTATRDDIVSRNHKGVEGHLEHAGVRVVRSGARLT
GPRSVRTGDGREFTAARGIVLATGSRPRILPGLEPDGHTVVTSDDALFAPGLPASVLVLG
GGAIGVEYASFHRSMGAEVTLVEAADRLVPLEDADVSRHLARGLKKRGIDVQTGARLEGA
ERLASGGVRATVRTARGELREIGAQRLLVAVGRVPVTDGLDLAAAGLATDGRGFVAPADW
SRLETAVPGIHVVGDLLPPPSLGLAHASFAEGLLVAETLAGVASAPVDYAAVPRVTYSAP
QTAAVGLTEAQAREAAYDVVVNTMPLTAVAKGMVHGQGGTVKVVAERDGRVLGVHLVGPH
VSEMIAESQLIVGWDAEPGDVARHVHAHPTLSEAVGEAFLSLAGRGLHQQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacagcacagtggatgtgatcgtgatcggcggcggcacgggcggctacagc
accgccctgcgcgcctcggccctgggcctgagcgtcctgctcgcggaacgcgacaaggtc
ggcgggacatgcctgcaccggggctgcatccccagcaaggccatgctgcacgcggcggaa
ctcgtcgacggcatagccgaggcgcgcgagcgctggggggtccgggcgagcgtggagtcg
gtcgactggtcggccctgaccgccacccgcgacgacatcgtctcccgcaaccacaagggc
gtggaagggcacttggaacacgcgggggtgcgggtggtgcgcagcggcgcccggttgacc
ggaccgcggtccgtacggaccggggacgggcgggagttcaccgccgcccggggcatcgtg
ctggccaccgggtcccggccgcgcatcctgccgggcctcgagcccgacggccacacggtg
gtgaccagtgacgacgcgctgttcgcacccggcctgccggcttcggtgctggtgctgggc
ggcggggcgatcggggtggagtacgcgtccttccaccgttccatgggcgccgaggtgacc
ctggtcgaggccgcggaccggctggtcccgctggaggacgcggacgtgtcccggcatctg
gcgcggggcctgaagaagcgcgggatcgacgtgcagaccggggcccggctggagggggcc
gagcggctcgcctccggcggggtccgggccaccgtgcgcaccgcgcggggggagctgcgg
gagatcggggcgcagcgcctgctggtggcggtcgggcgggtcccggtgaccgacgggctg
gacctcgcggcggccggactggcgaccgacggacgggggttcgtggccccggccgactgg
tcccggctggagaccgccgtcccggggatccacgtggtgggcgacctgctgccgccgccc
tcgctcgggctggcgcacgcctccttcgcggagggcctgctggtcgcggagaccctggcc
ggggtggcgagcgcgccggtggactacgcggcggtgccgcgggtgacctactcggccccg
cagaccgccgcggtcgggctgacggaggcacaggcgcgcgaggcggcgtacgacgtggtg
gtgaacacgatgccgctgaccgccgtggccaagggcatggtgcacgggcagggcggcacg
gtgaaggtggtggcggagcgggacgggcgggtgctgggcgtacacctggtggggccgcac
gtgtcggagatgatcgcggagagccagctgatcgtgggctgggacgcggaaccgggcgat
gtggcacggcacgtccacgcccacccgacgctgtcggaggcggtcggtgaggccttcctc
agcctggcgggccgcggcctgcaccagcagtag
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