Streptomyces nojiriensis: JYK04_06478
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Entry
JYK04_06478 CDS
T07326
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf03030
DNA replication
snf03430
Mismatch repair
snf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYK04_06478 (polC_3)
03430 Mismatch repair
JYK04_06478 (polC_3)
03440 Homologous recombination
JYK04_06478 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_06478 (polC_3)
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_06478 (polC_3)
Enzymes [BR:
snf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYK04_06478 (polC_3)
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYK04_06478 (polC_3)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYK04_06478 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QTI48613
LinkDB
All DBs
Position
6950445..6951182
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AA seq
245 aa
AA seq
DB search
MEDWHGMGDWHGGVLIGFDLETTGTEPGESRIVTAALVEVRGGTVRERRGWLADPGIPIP
EGASAIHGISTERAVAEGRPVREVADEVAGALVGHWRAGAVVVAYNAAFDLTLLSAELAR
HGLPSLADRLDGAPTGPVVDPLTIDRAVDRYRRGKRTLEAVCGVYGVTLDAAHDAGADAL
AAVQVARAIAERHPEVAALTPADLHARQSTWHARWARDFQSYLRRQGTPDAVIDEAWPLR
GLVPA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtggaggactggcacggcatgggggactggcacggcggtgtgctgatcggattcgacctg
gagacgaccggcacggagccgggggaatcgcggatcgtgacggcggccctggtcgaggtg
cgcggcggaacggtgcgcgagcggcgcggctggctcgccgatcccgggataccgatcccg
gaaggggcctcggccatccacgggatcagcacggagcgcgcggtcgccgaggggcgcccg
gtgcgggaggtcgcggacgaggtcgcgggggccctggtcggacactggcgtgccggagcg
gtggtggtcgcgtacaacgcggccttcgacctgaccctgctgagcgccgagctggcccgg
cacgggctgccctcgctggccgaccggctggacggggcaccgaccgggccggtggtggac
ccgctgaccatcgaccgggccgtggaccgctaccggcggggcaagcggaccctggaggcg
gtctgcggggtgtacggggtcaccctcgacgccgcgcacgacgccggggcggacgcgctg
gccgcggtccaggtggcccgtgcgatagccgagcggcatccggaggtggccgcgctcacg
ccggccgacctgcacgcacggcagagcacctggcacgcgcgctgggcccgggacttccag
tcgtacctgcgccgccagggcaccccggacgcggtgatcgacgaggcctggccgctccgg
ggcctggtccccgcgtag
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