Streptomyces nojiriensis: JYK04_06853
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Entry
JYK04_06853 CDS
T07326
Symbol
fadJ_2
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00071
Fatty acid degradation
snf00280
Valine, leucine and isoleucine degradation
snf00310
Lysine degradation
snf00362
Benzoate degradation
snf00380
Tryptophan metabolism
snf00410
beta-Alanine metabolism
snf00640
Propanoate metabolism
snf00650
Butanoate metabolism
snf00907
Pinene, camphor and geraniol degradation
snf00930
Caprolactam degradation
snf01100
Metabolic pathways
snf01110
Biosynthesis of secondary metabolites
snf01120
Microbial metabolism in diverse environments
snf01200
Carbon metabolism
snf01212
Fatty acid metabolism
Module
snf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JYK04_06853 (fadJ_2)
00650 Butanoate metabolism
JYK04_06853 (fadJ_2)
09103 Lipid metabolism
00071 Fatty acid degradation
JYK04_06853 (fadJ_2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JYK04_06853 (fadJ_2)
00310 Lysine degradation
JYK04_06853 (fadJ_2)
00380 Tryptophan metabolism
JYK04_06853 (fadJ_2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JYK04_06853 (fadJ_2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JYK04_06853 (fadJ_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JYK04_06853 (fadJ_2)
00930 Caprolactam degradation
JYK04_06853 (fadJ_2)
Enzymes [BR:
snf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JYK04_06853 (fadJ_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JYK04_06853 (fadJ_2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JYK04_06853 (fadJ_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
F420_oxidored
PALP
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Pyr_redox_2
Sacchrp_dh_NADP
NAD_binding_8
Rossmann-like
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QTI48985
LinkDB
All DBs
Position
7378684..7380855
Genome browser
AA seq
723 aa
AA seq
DB search
MSESTTIRWEQDETGVVTLILDDPDQSANTMNQAFKDSIAAIADRAEAEKDSIRGIIYTS
AKKTFFAGGDLKDMIRLRPEHAQIAFDTGTEIKRSLRRIETLGKPVVAAINGAALGGGYE
ICLASHHRVALDAPGSKIGLPEVTLGLLPAGGGVTRTVRLMGIADALLKVLLQGTQYTPQ
RALDNGLVHELAATPEEMLAKARAFIDANPESKQPWDVPGYKIPGGTPSNPRFAANLPAF
PANLKKQLNGAPYPAPRNILACAVEGSQVDFETALTIEARYFTELVTGQTAKNMIQAFFF
DLQAVNAGRSRPQGIEPRQVRKVAVLGAGMMGAGIAYSCARAGIEVVLKDVTAEAAAKGK
AYSEKLLDKALSRGRTTEAGRAELLARITPTADAADLAGCDAVIEAVFEDTSLKHKVFQE
IQDVIEPDALLCSNTSTLPITGLAEGVARPADFIGLHFFSPVDKMPLVEIIKGERTGDEA
IARAFDLVRQINKTPIVVNDSRGFFTSRVIGQFINEGVAMVGEGIEPASIEQAAAQAGYP
AKVLSLMDELTLTLPRKIRNESRKAFEAEGKAWTEHPADAVIDRMVDEFGRPGRSGGAGF
YEYDESGKRARIWPGLREHFAKPDAEIPFADMKERMLFSEALDTVRCLDEGVLTSIADAN
IGSIMGIGFPAWTGGVIQYINGYEGGLAGFVARARELADTYGERFIPPASLIAKAERGET
YAD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtccaccacgatccgctgggaacaggacgagaccggcgtcgtcaccctgatc
ctcgacgaccccgaccagtccgccaacacgatgaaccaggccttcaaggactccattgcg
gcgatcgccgaccgcgccgaggccgagaaggactccatccggggcatcatctacacctcc
gccaagaagaccttcttcgcgggcggcgacctcaaggacatgatccggctccgccccgag
cacgcgcagatcgccttcgacaccggcaccgagatcaagcgctccctgcgccggatcgag
accctcggcaagcccgtcgtcgccgccatcaacggtgcggccctcggcggcggttacgag
atctgcctggcctcccaccaccgcgtcgccctcgacgcgcccggctccaagatcggcctg
cccgaggtcaccctcggcctgctccccgccggtggcggtgtcacccgtaccgtgcgcctg
atgggcatcgccgacgcgctgctcaaggtgctgctccaggggacccagtacaccccgcag
cgcgccctggacaacggcctggtgcacgaactggccgccacgcccgaggagatgctggcc
aaggcccgcgccttcatcgacgcgaaccccgagtcgaagcagccctgggacgtacccggc
tacaagatccccggcggtacgccgtccaacccgcggttcgccgcgaacctcccggccttc
ccggccaacctgaagaagcagctgaacggggccccgtacccggccccgcgcaacatcctg
gcctgcgccgtcgagggctcccaggtggacttcgagaccgcgctgaccatcgaggcccgc
tacttcaccgagctggtcaccggccagaccgccaagaacatgatccaggcgttcttcttc
gacctccaggccgtcaacgcgggccgcagccgcccgcagggcatcgagccgcggcaggtc
cgcaaggtcgccgtcctcggcgccgggatgatgggcgcgggcatcgcctactcctgcgcc
cgcgcgggcatcgaggtggtgctgaaggacgtcaccgccgaggccgccgccaagggcaag
gcgtactccgagaagctgctcgacaaggcgctctcccggggccggaccaccgaggcgggg
cgtgccgagctgctcgcccggatcaccccgaccgccgacgcggccgacctcgcgggctgc
gacgccgtcatcgaggccgtcttcgaggacacctccctcaagcacaaggtgttccaggag
atccaggacgtcatcgagccggacgcgctgctgtgctccaacacctccacgctgcccatc
acgggcctcgcggaaggcgtcgcgcggccggccgacttcatcgggctgcacttcttctcg
cccgtggacaagatgccgctggtggagatcatcaagggggagcggaccggcgacgaggcc
atcgcccgcgccttcgacctggtccgccagatcaacaagaccccgatcgtggtcaacgac
tcgcgcggcttcttcacctcgcgcgtcatcggccagttcatcaacgagggcgtggccatg
gtcggcgagggcatcgagcccgcctcgatcgagcaggccgcggcccaggccggctacccg
gccaaggtgctctcgctgatggacgagctcaccctgaccctgccgcgcaagatccgcaac
gagagccgcaaggccttcgaggccgagggcaaggcgtggaccgagcaccccgccgacgcg
gtcatcgaccgcatggtggacgagttcggccgccccgggcgcagcggcggggccggcttc
tacgagtacgacgagtcgggcaagcgcgcccgcatctggccgggcctgcgcgagcacttc
gccaagccggacgccgagatcccgttcgccgacatgaaggagcggatgctcttctccgag
gccctggacaccgtccgctgcctcgacgaaggcgtgctcacctcgatcgccgacgccaac
atcggctccatcatgggcatcggcttcccggcctggacgggcggcgtgatccagtacatc
aacggctacgagggcggcctggccggcttcgtggcccgtgcccgcgagctcgccgacacg
tatggcgagcgcttcatcccgccggcctcgctgatcgcgaaggcggagcgcggcgagacc
tacgcggactga
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