Streptomyces nojiriensis: JYK04_07151
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Entry
JYK04_07151 CDS
T07326
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JYK04_07151 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snf03400
]
JYK04_07151 (fpg2)
Enzymes [BR:
snf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JYK04_07151 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JYK04_07151 (fpg2)
DNA repair and recombination proteins [BR:
snf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JYK04_07151 (fpg2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF8145
Motif
Other DBs
NCBI-ProteinID:
QTI49280
LinkDB
All DBs
Position
7732583..7733443
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEALREYLDEHLTGRVVERVLPLAVSVLKTYDPPPAALEGQPAGTPARYGKFLA
LPVGELHLVTHLARAGWLRWQDTLPAQPPRPGKGPLALRVSLVGGGGFDLTEAGTQKRLA
VYVVRDPQEVPGIARLGPDPLAEGFDRDAFAALLAGERRQIKGVLRDQSVIAGIGNAYSD
EILHAARVSPFKLAASFTEEQVTQLYEAVRSTLGEAVGRAHGVSAGALKAEKKSGLRVHG
RAGEPCPVCGDTVRSVSFADSSLEYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaggccctgcgggagtacctcgacgagcacctcaccggg
cgggtggtcgagcgcgtcctcccgctggccgtgagcgtgctcaagacgtacgacccaccg
ccggccgccctcgaagggcagccggccggcacccccgcccggtacggcaagttcctggcc
ctgccggtcggcgagctccacctcgtcacgcacctggcccgggccggctggctgcgctgg
caggacaccctgcccgcgcagccgccgcgccccggcaaggggccgctcgccctgcgcgtc
tccctcgtgggcggcggtggcttcgacctcaccgaggccggtacccaaaagcgcctcgcc
gtgtacgtggtccgcgacccgcaggaggtgcccggcatcgcccgcctcggccccgacccg
ctcgccgagggcttcgaccgggacgccttcgccgcgctgctcgcgggggagcggcgccag
atcaagggcgtgctgcgggaccagagcgtgatcgcgggaatcggcaacgcctacagcgac
gagatcctgcacgcggccagggtctcgccgttcaagctcgccgcctccttcaccgaggag
caggtcacccagctctacgaggccgtgcggagcaccctgggcgaggccgtcggccgggcc
cacggggtgtccgcgggagcgctcaaggccgagaagaagagcggcctgcgggtgcacggc
cgggccggtgagccgtgccccgtgtgcggggacaccgtgcgctcggtgtccttcgccgac
tcctccctggagtactgccccacctgccagaccggcgggaagccgctcgcggaccggcgg
ctctcacgcctcctcaaatag
DBGET
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