Streptomyces nojiriensis: JYK04_07488
Help
Entry
JYK04_07488 CDS
T07326
Symbol
dacD_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00550
Peptidoglycan biosynthesis
snf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYK04_07488 (dacD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snf01002
]
JYK04_07488 (dacD_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snf01011
]
JYK04_07488 (dacD_2)
Enzymes [BR:
snf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JYK04_07488 (dacD_2)
Peptidases and inhibitors [BR:
snf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
JYK04_07488 (dacD_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
snf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JYK04_07488 (dacD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QTI49615
LinkDB
All DBs
Position
complement(8243286..8244473)
Genome browser
AA seq
395 aa
AA seq
DB search
MSIRSSGRRTGAGAAALAIGASVLLVPAAAGAARAEPLPPRPAPAVDASLLHRAGTHVRA
RQGAPALPDDVSALSWLVADAGTGAVLAAHDAHRRLPPASTLKTLFALTALPHLPGSGRH
TVTEAELDEVPEGSSTVGLSADHTYRVADLWRGVFLSSGNDAVHVLAEMNGGWDVTSAQM
QAKARALGARDTTVVSPDGFDADGQASSAYDLAVFGRTGLADPAFAEYAATADARFPGGT
TTDGSPTWTYGIENTNRLVTGQDGLGRYPGIIGVKNGYTSQAGFTLIAAARRDGRTLLAT
VMNPQWGGANAVYEEARSLLDWGFAAAGRVDPVGSLDPPAPPATPRTVAARAARAVTPER
LDVGTPMVYGLSAAFLAAVAVLTGAGVLRRRRDLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagatcctctgggcgcagaaccggcgcgggcgccgcggctctcgccatcggc
gcatcggtcctcctcgtaccggcggcggccggcgccgcgcgggccgagccgctgccgccg
cggcccgccccggccgtcgacgcctcgctgctgcaccgggccggaacccacgtacgggcg
cggcagggggcgcccgcgctgccggacgacgtgtccgccctgtcgtggctggtggcggac
gccggtacgggtgcggtgctcgcggcccacgacgcacaccgccggctgccaccggccagc
accctcaagaccctgttcgccctcaccgcactgccccacctgcccggctcgggccggcac
acggtcaccgaggccgagctggacgaggtgccggaggggagcagcacggtgggtctgtcc
gcggaccacacctaccgggtggccgacctgtggcggggcgtcttcctcagctcgggcaac
gacgccgtgcacgtgctggccgagatgaacggcggctgggacgtcacctcggcgcagatg
caggccaaggcgcgcgccctgggcgcacgggacaccaccgtcgtctccccggacggattc
gacgcggacggccaggcctcctcggcctacgacctcgccgtcttcggccgtacgggcctt
gccgacccggccttcgccgagtacgcggcgaccgccgacgcccgcttccccggcggcacc
accaccgacggcagtcccacctggacgtacgggatcgagaacaccaaccggctggtgacc
ggtcaggacgggctgggccggtacccggggatcatcggggtcaagaacggctacacctcc
caggcgggcttcacgctgatcgcggccgcccgtcgggacggccgcaccctgctggcgacg
gtgatgaacccccagtggggcggcgcgaacgccgtgtacgaggaagcgcgctccctgctg
gactggggattcgccgctgcgggacgggtggatccggtcgggtcgctcgaccccccggcg
ccgcccgcgacgccgcgcaccgtcgccgcccgggccgcccgcgccgtcacgccggagcgg
ctcgacgtgggtacgccgatggtctacggcttgtcggccgcgttcctcgccgccgtggcg
gtcctgaccggggcaggtgtcctgcggcgccgccgggacctgccgtga
DBGET
integrated database retrieval system
