Streptomyces nojiriensis: JYK04_07639
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Entry
JYK04_07639 CDS
T07326
Symbol
lsrD
Name
(GenBank) Autoinducer 2 import system permease protein LsrD
KO
K10440
ribose transport system permease protein
Organism
snf
Streptomyces nojiriensis
Pathway
snf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYK04_07639 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snf02000
]
JYK04_07639 (lsrD)
Transporters [BR:
snf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
JYK04_07639 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Phage_holin_2
Motif
Other DBs
NCBI-ProteinID:
QTI49766
LinkDB
All DBs
Position
complement(8407678..8408736)
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AA seq
352 aa
AA seq
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MPPSSSPSPPPSPPPSPSPSSSRPSPPRSLLDRLRGHHIGTYGLLVLAVLLFLVFSLVLP
DTFPTRDNVSSILSNQSIPAILALGATIPIATGKFDLSMGYGLGLAHVMVLKLIVDTGWP
WPLACLTVVLGGALVGVLNGVIVEYVRIDSFIATLGTGSMMYAVTGWITDGSRIVPGPDG
LPTAFTGLYDSRFLGLPLPAYYVLALAAALWVVLERLPLGRYMYVIGSSRRTADIIGIPS
HRYSVYAFAGSGLVTGLAGVLLAAQQQTGNPSVGLDYLLPAFVGALLGSTTIKPGRVNAL
GTVVAVAVLAIGLAGIGQLGADFWATPLFNGATLLIAVGLAGYSARRRLRTP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccccttcctcttccccgtccccgcccccgtccccgcccccctcgccctcgccctcg
tcttctcgtccgtccccgccgcggtccctgctggaccgcctgcggggccaccacatcggc
acctacggcctgctcgtcctcgccgtcctgctcttcctggtcttctccctcgtcctgccg
gacaccttccccacccgggacaacgtctcctcgatcctgtccaaccagtcgatcccggcc
atcctggccctcggcgcgaccatccccatcgccaccggcaagttcgacctgtccatgggc
tacggcctcggcctggcccatgtgatggtgctgaagctcatcgtcgacacgggctggccc
tggccgctcgcctgcctcaccgtggtcctcggcggggcactggtcggcgtcctcaacggc
gtcatcgtcgagtacgtacggatcgactccttcatcgccacgctcggcaccggcagcatg
atgtacgccgtcaccggctggatcaccgacggctcccggatcgtccccggcccggacggc
ctgccgaccgccttcaccggcctctacgactcccggttcctcgggctgccgctgcccgcc
tactacgtcctggccctcgcggccgcgctctgggtggtcctggaacggctgccgctcggc
cggtacatgtacgtcatcggctccagccggcgcaccgccgacatcatcggcatccccagc
caccggtactccgtctacgccttcgccggatcgggcctggtcaccggcctcgccggggtc
ctcctcgccgcccagcagcagaccggcaacccgagcgtcgggctggactacctgctcccc
gcattcgtcggcgccctgctcgggtccaccacgatcaaacccggccgcgtcaacgccctc
ggcaccgtcgtggcggtcgcggtcctcgccatcggcctcgccggcatcggccagctcgga
gccgacttctgggccacgcccctgttcaacggggccaccctgctcatcgccgtcggcctg
gccggctactccgcccggcgccggctgcgcaccccctag
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