Simkania negevensis: SNE_A00230
Help
Entry
SNE_A00230 CDS
T01559
Symbol
mip-A
Name
(GenBank) macrophage infectivity potentiator
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sng
Simkania negevensis
Pathway
sng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SNE_A00230 (mip-A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A00230 (mip-A)
Enzymes [BR:
sng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SNE_A00230 (mip-A)
DNA repair and recombination proteins [BR:
sng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SNE_A00230 (mip-A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RTBV_P12
Motif
Other DBs
NCBI-ProteinID:
CCB87901
UniProt:
F8L520
LinkDB
All DBs
Position
gsn.131:complement(24411..27410)
Genome browser
AA seq
999 aa
AA seq
DB search
MKPTLHVSNDFRALRKQLAHQLFLTPSAPFEQKVVLLPDLKQKNELLLHFLKDVDVVMGV
DFMELGAGLQFLCKLLAGQTLQLPPLDLLTLHLLPLVQEFQSEKKAYPLAAALAMEFLRY
GKFGEGKLIEWAQKEGWQQTLWKTVFSQWDIPSKLLDLSLKKPNQPLEIHLYKFSFLPEL
YYRFLEKVAAHVPVHIYQFSPCATFWTDTFSEKERIFLEKKVDANVRAEWNAYLQDRPLL
LAHLGKLARQTFRFFEEEDFPIEEHYVSPKTDTLLHQLQHQILHYEAKQTLNQDRSILLH
PAASKRREVEILFTTLLSLDFNPSDIRIYAPDISSYAPYISLIFGAKESPFPFSIADLPR
EQESPLLQAFLNLLMLKQNRFNKTAVLKLLSSPPVRQKFRLKEKDVEAFGDWMEKGGVKW
GMDRQHRKFLLQGREMHEQGEVGTWEDTFKSLLHGFTTLPKDRPAWEKPILDFSDAATLG
TCVSIVRSLEKELSFLETASLSLAEWSEKLRFLLNRYFEVDEKELSTFKWVEEKFALLES
KALPKDSYPFLPLFEFIKKAFQEKTGRKEAVQVEALRFASLKLAALDHAPVICLLGLDET
QFPRVSSKSSLCELSLPKQPLSQYEDRLLFLESLFAASSHLIMSYVSISEEDGKEQAPSP
IVQELLTILDPISITEKHPPFLFHADYFDAPKPTSHLAFRAAQKFYTPHSKPTPFIPEFL
TPTPLPPSQTEDLTIDLRALSRFAKHPLRFYLNHALHFYLQYEEKDEEFTLSPLNQMKLR
EEAHHRPFEEVFEQADLQGKLPLGRFKEVARLHASEEIALLKEALKQFEFVEQPKTIDLA
LTVPLDRGRIAHLEGTLGGVTSEGLLFHGEKKLHDLLKIWPLYLAFASSDQMEKKKLLLT
KTGERLSFPKLDPQHALASYLLYYEKALTHPSPFLPAWGQTFLEKGPQELAKKIEDTTDP
YALWIFRPHQYDADILFETWATLLQTTFHPLQEALNDDL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacgctccatgttagtaacgactttcgcgcccttcgcaaacagctcgcacat
cagctgtttttgactccgtccgccccctttgagcaaaaagttgtccttttgcctgacctc
aagcaaaaaaacgagcttcttctccattttttgaaagatgtcgatgtagtgatgggggta
gactttatggaactcggcgcaggccttcaatttctctgcaaacttcttgcagggcagact
ctccagctcccaccacttgaccttttgaccttgcatctcttacctcttgttcaagaattt
caatctgaaaagaaagcctatcctctagcagcagctctagccatggaattcttgcgttat
ggcaaatttggtgagggaaaactgatcgaatgggctcaaaaagaagggtggcaacaaaca
ctttggaagacagttttttctcaatgggatattccctctaaactacttgatttatctttg
aaaaagccaaatcaacctcttgaaattcatctttataagttttcgtttttgcccgagctt
tactacaggtttttggaaaaagtcgcagctcatgttcccgtgcacatttaccagttttca
ccttgcgcaaccttttggaccgacacattctctgaaaaagagcgcatctttttagaaaaa
aaagtcgatgccaatgtgcgcgccgagtggaatgcttaccttcaagatcgtcctttgctt
ttagctcacttagggaagcttgcacgccaaacctttcgtttttttgaagaagaagatttt
ccgatagaagagcattatgtctcgccgaagaccgatactctcctccatcaactgcagcat
cagattctccattacgaagccaaacagacattgaatcaagatcgctcaattttacttcat
cccgccgcctccaaacgacgcgaagttgaaattcttttcacaacccttctctcgctcgac
tttaacccctctgacattcggatttatgctcctgatatttcatcttatgctccctatatt
tctcttatttttggagcgaaagaatccccctttccattttcaattgccgatttgcctcgg
gagcaagagtcgcctttattgcaagcctttctcaatttgctcatgctaaagcaaaatcga
tttaacaaaaccgctgttttaaaactcttaagctcaccccctgtcagacagaagtttcgt
ctcaaagaaaaagatgtcgaagcctttggcgactggatggaaaaaggaggtgtgaagtgg
ggaatggaccgtcagcaccggaaatttttactccaagggcgagaaatgcacgagcaagga
gaagtaggaacttgggaagacacttttaagtcgctactccatggctttacaaccttaccc
aaagaccgtcctgcatgggagaagcctattctcgatttttccgatgcagcaaccttaggc
acctgtgtgtcaattgtgagaagtcttgaaaaagagctctctttcctcgaaacagcatcc
ctttcccttgcagagtggagtgagaagctccgctttcttttaaaccgttactttgaagtc
gatgaaaaagagctttccaccttcaaatgggtcgaagagaaatttgctttgctcgagtct
aaggccttgcccaaagactcttaccccttcctccctctctttgagtttatcaagaaagcc
tttcaagaaaaaacaggaagaaaagaagcagtccaggttgaagccttgcgatttgcctcc
ctcaaactggccgccctcgaccatgcccctgtcatctgccttcttggtcttgatgaaacc
cagtttcctcgggtttcgtccaaaagttctctatgcgaacttagccttcccaagcaaccc
ctgagccaatatgaagaccgtctcctctttttagaatctctcttcgctgcaagctcccat
ctcatcatgagctacgtctctatcagtgaagaagacggcaaagagcaagctccctcaccg
atcgttcaagagctcctcacgattttagatcccatctcaattaccgaaaagcatccccct
tttctctttcatgcagactacttcgatgcgcccaaacccacatcccaccttgcctttcgc
gccgcgcagaaattctacacacctcactcaaaacccacccccttcattcccgaatttctc
acaccgactcctttgcctccctcacaaacagaagatctcacgattgatcttagagccctc
agccgttttgcaaagcatcccttacgtttttacctcaatcatgccctccacttttacctc
caatacgaagaaaaagacgaagagtttaccctttcaccgctgaatcaaatgaaactccgc
gaagaggcccatcaccgcccctttgaagaagtctttgagcaagccgaccttcagggcaaa
cttcctcttgggcgcttcaaagaagtagcgaggctacatgcttcagaagaaattgcctta
ctaaaagaggcgctcaaacaatttgagtttgtagagcagcctaaaaccatcgatctcgcc
ctaaccgttcccctggaccgcggccgcattgcacatcttgaaggaacattagggggagta
acttctgaagggctactctttcatggagagaaaaaactgcacgatttacttaaaatctgg
cctctttatctcgctttcgcatcttccgatcagatggagaaaaaaaagcttctactcaca
aaaacaggagagcgtctctcatttcccaaactcgatccgcagcatgctctagcatcttac
ctgctctactatgaaaaagccctcacgcatccatcaccctttctcccagcttgggggcaa
acgtttctcgaaaaagggccccaggaactcgccaagaaaatcgaagacaccacagatcct
tatgcactttggattttccggccccaccaatacgatgccgacatcctctttgaaacttgg
gcaacccttttacaaacgaccttccacccccttcaggaggctttgaatgacgacctttga
DBGET
integrated database retrieval system
