Simkania negevensis: SNE_A02190
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Entry
SNE_A02190 CDS
T01559
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
sng
Simkania negevensis
Pathway
sng00540
Lipopolysaccharide biosynthesis
sng01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SNE_A02190 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sng01005
]
SNE_A02190 (rfaF)
Enzymes [BR:
sng01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
SNE_A02190 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
sng01005
]
Core region
SNE_A02190 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CCB88096
UniProt:
F8L5V4
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All DBs
Position
gsn.131:226656..227720
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AA seq
354 aa
AA seq
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MEGMKKLQPKNIIVRMPNWIGDLVMATPILTDLRFAFPDASITAMVYEKIGPLIEADPAI
DELFLFSRAKGMIRRIRQRNIVEKLRDGNYDLGLLLTNSFSSAWRFWQGGVKNKVGFSGD
GRSFLLDQAVPFPKERKTQHLVLTYKALLKHIGIPRSETAPRLFLKKDEKEGAWDFVKRF
DIPAEAKLIGINPGAAYGSAKCWLPERFREVAKRLIDEDPSHFVLFFGDLSHKQLINEIC
TGLPARAVNLAGQTDLRLLLALISICSVFLTNDSGPMHIADSLDIPLVALFGSTDPIATG
PYRHGQAVMQKKVPCSPCFKRVCPIDFPCMKGLTVEDVFNRVLKTLHQNEQVTC
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatgaaaaaattgcagccgaaaaatattatcgttcggatgccaaactggatc
ggcgatctcgtgatggcaactccgattttgacagatttacgcttcgcatttccagatgcg
tcaatcactgcaatggtttatgaaaaaatcggaccgttaatcgaagcagatcccgcaatt
gatgaactttttctcttttctcgtgctaaaggaatgatccggcgcattaggcaacggaat
attgtcgaaaaattgcgcgatggaaattacgatctgggcttgcttctcacgaattccttt
tcttctgcatggcgtttttggcaaggtggtgtgaaaaataaggttggttttagcggagat
ggcagatcttttttactcgatcaagctgtccccttcccaaaagaaagaaagacgcaacat
cttgtcctgacttataaagctttactcaagcacattggcattccccgctctgaaacagct
ccgcgcctttttctaaaaaaagatgagaaagaaggggcatgggactttgtcaagcggttt
gacattccagctgaggcgaagctgattggaatcaatccaggtgcggcatatggatcggca
aaatgctggctacctgaaagatttcgagaggtggcaaaaagattgatcgatgaagacccc
tcccattttgttctattttttggtgatctatcgcacaagcaattgatcaatgagatttgc
accggactacctgcgcgagctgtcaacttagccggacaaacagatcttcgtttactcttg
gccctcatttccatttgctctgtctttttaacgaatgatagtgggccgatgcacattgcg
gatagtttggatattccccttgttgcactttttggatcgacagatccgattgcgaccgga
ccgtatcgccatggtcaagctgtcatgcaaaagaaagtgccttgctctccttgctttaag
agagtgtgtccgattgactttccttgcatgaagggattaacggtggaagatgttttcaat
cgtgttctcaagacacttcatcaaaatgagcaggtcacatgctaa
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