Simkania negevensis: SNE_A05870
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Entry
SNE_A05870 CDS
T01559
Symbol
groEL-A
Name
(GenBank) heat shock protein 60
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sng
Simkania negevensis
Pathway
sng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE_A05870 (groEL-A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sng03019
]
SNE_A05870 (groEL-A)
03110 Chaperones and folding catalysts [BR:
sng03110
]
SNE_A05870 (groEL-A)
03029 Mitochondrial biogenesis [BR:
sng03029
]
SNE_A05870 (groEL-A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sng04147
]
SNE_A05870 (groEL-A)
Enzymes [BR:
sng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SNE_A05870 (groEL-A)
Messenger RNA biogenesis [BR:
sng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SNE_A05870 (groEL-A)
Chaperones and folding catalysts [BR:
sng03110
]
Heat shock proteins
HSP60 / Chaperonin
SNE_A05870 (groEL-A)
Mitochondrial biogenesis [BR:
sng03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SNE_A05870 (groEL-A)
Exosome [BR:
sng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SNE_A05870 (groEL-A)
Exosomal proteins of other body fluids (saliva and urine)
SNE_A05870 (groEL-A)
Exosomal proteins of breast cancer cells
SNE_A05870 (groEL-A)
Exosomal proteins of colorectal cancer cells
SNE_A05870 (groEL-A)
Exosomal proteins of bladder cancer cells
SNE_A05870 (groEL-A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCB88464
UniProt:
F8L6W1
LinkDB
All DBs
Position
gsn.131:complement(624682..626283)
Genome browser
AA seq
533 aa
AA seq
DB search
MTSTPKELIFEEEARAKLKEGIDKLADTVGVTLGPKGKNVGLESSWGAPTITNDGNSIVK
DIELKDPYANMGVSMGKEVARKIKDKSGDGTTTGIILLRALVKDGVRNIASGASPINVKR
GMEKAVNRVLEELDALATPVEKAEAIENIATVSASGNREIGKVIYEAIDKVGKSGVITIE
EGKGTTTTIEMVEGMQFDRGYTSPYFCTNAENMLVEMDQAHLLITDKKISAIQEILPLLQ
AVAASGQSLLIIAEDIEGDALSTLVVNKLRGTLKIAAVKAPGFGDRRKAILEDIAVLTGA
TVVSEDKGMHLKDATLEVLGKAEKIEISKDSTTIVGGMGQREDIDARLKQIDAEIENASS
DYDREKLEERKAKLQGGVAVIRVGAPTEPEMKQKKQAFEDSLNSTRAAQESGFVPGGGVA
LLRASAKLRDMKLDAEEQVGAAIVMHACSAPFKQIVENCGKDSSIYLEEVLSKKNNIGFN
AITEEVEDLIKAQVIDPTKVVKNALKFAASTAGVILLSEALIIDAPDDDEESA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgacacccaaagagctgattttcgaagaagaagcacgcgcaaagttgaaagaa
ggaattgacaagcttgctgatacagtcggcgttacgcttggacccaaaggaaagaatgta
ggactcgagtccagctggggtgctccaaccatcacaaacgatgggaacagcatcgtcaaa
gacattgaactgaaagacccttatgccaacatgggtgtttcgatgggaaaagaagttgca
cgtaaaatcaaagacaagtcgggcgatggaaccacaactggaatcattcttttgcgcgca
cttgtcaaagatggggtccgtaatatcgcatcaggtgctagcccgatcaacgtgaaacgt
ggaatggaaaaagctgtaaatcgcgttctagaggagctcgatgcgcttgccacacccgtc
gaaaaagctgaagctattgaaaatatcgccacagtttctgcttctggaaatagagaaatc
ggaaaagtgatttatgaagccattgacaaagtaggtaagtcaggtgtgatcacaatagaa
gaaggaaaaggaaccacaacgacgattgaaatggttgaagggatgcaatttgaccgcggc
tacaccagtccctatttctgcactaatgcagaaaacatgctggttgaaatggatcaagcg
caccttctcatcactgataagaaaatttcagccatccaagaaatcctccctctgcttcaa
gctgtggctgcatcaggccaatcccttctcattatcgctgaagacatcgaaggagacgct
ctttcaacgcttgtcgtgaataaacttcgtggcacgttaaaaattgcagctgtaaaagca
cctggatttggcgatcgtcgcaaagcgatacttgaagacattgcagtgctgactggtgcc
acagttgtatcagaagataaaggaatgcaccttaaagatgcgaccttggaagtccttgga
aaagcagaaaaaattgagatcagcaaggattcgacaaccattgtcggtgggatgggtcaa
agagaagatatcgatgcacggcttaagcaaatcgatgcagaaattgaaaatgcctcttcc
gattacgaccgagaaaaacttgaagaacgtaaagctaaacttcaaggtggcgttgccgtc
attcgtgttggcgctccaacagaacctgagatgaagcaaaagaaacaggcattcgaagat
agcttgaattcaacccgtgcggctcaagaaagtggcttcgttccaggaggaggagtagcc
cttttgcgcgcaagtgcaaaacttcgcgatatgaaactcgatgccgaagaacaagttggc
gctgcaatcgtcatgcacgcttgttctgctccctttaaacaaatcgtcgagaattgtgga
aaggacagctcaatttatcttgaagaagtccttagcaaaaaaaataacatcggattcaat
gccataaccgaagaagtcgaagacctcatcaaagctcaagtcattgatcccaccaaagtg
gttaaaaatgccttgaagtttgccgcttcaacagctggtgtgatcctcctctcggaagca
ctcatcattgatgctcctgatgacgatgaagaatcggcttaa
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