Simkania negevensis: SNE_A07490
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Entry
SNE_A07490 CDS
T01559
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sng
Simkania negevensis
Pathway
sng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE_A07490 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sng03019
]
SNE_A07490 (pnp)
03016 Transfer RNA biogenesis [BR:
sng03016
]
SNE_A07490 (pnp)
Enzymes [BR:
sng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SNE_A07490 (pnp)
Messenger RNA biogenesis [BR:
sng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SNE_A07490 (pnp)
Transfer RNA biogenesis [BR:
sng03016
]
Prokaryotic type
tRNA degradation factors
SNE_A07490 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
CCB88626
UniProt:
F8L7A5
LinkDB
All DBs
Position
gsn.131:complement(782758..784815)
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AA seq
685 aa
AA seq
DB search
MSKNSLLQVKPLGGFIKREGKPTERETLVCRLIDRPIRPMFEEGYYTETQLITSVLSYDG
VNAPEPLAICANSAALVLSDIPLIKPIAGVRVGMIEDRFVINPTVQEQEDSVLDLMLAGT
EDAILMIEGYCDFLTEDQVMEAIEEGHQAIKLICQKLSDWQATHGKTKKRDELRLLPTGL
LEEVDSIMNAPLQDAIRISEKQVREDSLSAIKETVVEKLLPEGAEDKHKYAPHEVQMAIK
KVTSDHMRRMILKENKRCDGRGPEDVRQIWIDMDYLPRTHGSAVFTRGETQTIAVCTLGG
ESMGQRYEDLNTDGIRRFYLQYNFPPFSVGESGRIGPPGRREVGHGKLAERALQCTIPEK
DSFPYTIRLESNITESNGSSSMASVCGGCLALMQAGVPIKRPIAGIAMGLILEKDSYAIL
SDILGVEDALGDMDFKITGDEKGITAFQLDIKVEGINPQIMKVALAQAKQGRIHILHKML
EACPKSNEHLSQHAPRIETVQVKPSQIGTIIGPGGKQIREIVELSGADIDIDDSGLVSIA
SSTKEGMDRAKEIIYNLTAEVEIGQTYKGKIVTIKEFGLFVAILSKQGLCHISELSYQRI
ENIHDHYKEGDSIEVKVLEINNNGQIRLSHKAILEAPEGYVEPKRDEQPRRPPPRRDGGS
RDGGNRKPQRKPEILKPPPMPVNKD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaattctcttctgcaggtaaaacccttgggaggatttatcaaacgcgaagga
aagcccacagagcgagaaaccctcgtttgccgcttgatcgatcgccccattcgcccaatg
tttgaagaaggctattacactgaaacacaattgatcacatcggttctctcttatgatggt
gtgaacgctcctgaacctctcgcaatttgcgctaactcagcggctcttgtcctttctgac
attccccttattaagcctatcgcaggagtacgcgttggaatgatcgaagaccgctttgtc
attaacccaacagtccaagagcaagaagattcagttctcgacttgatgcttgccggaact
gaagatgcgatcttgatgatcgaagggtactgtgacttcttgactgaagatcaagtgatg
gaagctattgaagaaggacaccaagccattaagttgatttgtcaaaagctttctgattgg
caagctacacacggtaaaactaaaaagcgtgacgagctccgtctacttccaaccggtcta
ttagaagaagtcgatagcatcatgaatgcacctttacaagatgccattcggatttcagaa
aaacaagttagagaagattccctttctgcaatcaaagaaactgtcgtagaaaaactacta
ccagaaggtgctgaagacaagcacaagtacgcccctcatgaagttcagatggcaataaaa
aaggtgacttcagaccacatgcgtcgaatgatcctcaaagaaaataagcgttgcgatgga
cgtggcccagaagatgtccgccaaatctggatcgatatggattaccttccccgcacacat
ggaagcgcagtgtttacgcgaggagaaacccaaacaattgctgtttgtacacttggtgga
gaaagcatgggacaacggtatgaggatctcaataccgatgggattcgacggttttatctt
cagtacaactttcctcctttttccgtcggagaatcaggccgtattggccctccaggacga
cgagaagtgggacacggaaaacttgcagaacgtgctcttcaatgcactatcccagaaaaa
gattctttcccctatacgatccgcttggagtcaaatatcactgagtctaatggctcatcg
tcgatggcctcggtttgcggtggctgcttagctttaatgcaagctggagtccccatcaaa
cgccctattgcaggaattgcaatgggtctgatccttgaaaaagattcatacgccattctt
tctgacatccttggggtagaagatgcacttggcgacatggactttaaaatcaccggggac
gaaaaagggatcactgctttccagctcgatatcaaagttgaaggaatcaaccctcaaatc
atgaaagtagctcttgcgcaagccaagcagggtcggatccacatcctccataagatgctt
gaagcttgtccaaaatcaaatgagcacctctctcagcacgctccacgcatcgaaacggtt
caagtcaaaccaagtcagatcggaaccatcattggccctggtggaaagcagatccgcgag
attgtggaattatcaggtgctgatatcgatatcgatgatagcggccttgttagcatcgcc
tcttcgacaaaagagggaatggatcgtgccaaagaaatcatctacaacctcacagcggaa
gtggaaattgggcaaacttacaaaggaaagatcgtcacaattaaagaatttggtctcttt
gttgccatcttgagtaaacaagggctttgccatatttctgagctctcctaccaaagaata
gagaacattcacgatcactataaagaaggtgattcaatcgaagtcaaggttcttgagatc
aataacaatggtcaaatccgtttaagccataaagcaattcttgaagctcctgaaggttat
gttgagccgaagcgagacgagcagccaagacggccgcctcctcgtcgcgatgggggtagc
cgcgatggaggcaatcggaaacctcagcggaagcctgaaattctcaagccgccacccatg
ccggtgaataaagactaa
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