Simkania negevensis: SNE_A08080
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Entry
SNE_A08080 CDS
T01559
Name
(GenBank) putative uncharacterized protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sng
Simkania negevensis
Pathway
sng03030
DNA replication
sng03430
Mismatch repair
sng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNE_A08080
03430 Mismatch repair
SNE_A08080
03440 Homologous recombination
SNE_A08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sng03032
]
SNE_A08080
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A08080
Enzymes [BR:
sng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNE_A08080
DNA replication proteins [BR:
sng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNE_A08080
DNA repair and recombination proteins [BR:
sng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNE_A08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
ExoX-like_C
SAMD1_WH
Nexin_C
Motif
Other DBs
NCBI-ProteinID:
CCB88685
UniProt:
F8L7F3
LinkDB
All DBs
Position
gsn.131:complement(839245..839943)
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AA seq
232 aa
AA seq
DB search
MAKRPIFYDTETTGVKPDKDRIIEIAAFDPELNRTFEALINPEIPIPEEATAVHNITNEM
VKDAPTFKQVGVDFASFCSGEVVLIAHNNDAFDLPFIRSEFERNELTLPKWPYIDSLKFS
RKYRPDLPRHSLQHLREYHGFPANNAHRALDDVIVLHQVFSEMIDDLTMDTILELMSEKQ
VLRHMPFGKHRGKPLKEIPPDYVRWLHENGALDKPDNQELKDAFSKLGMIPN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacccattttttatgacacagaaacaactggtgtgaaacccgataaagac
cggatcatcgaaattgctgcctttgacccagaattgaatcgcacattcgaagcgctcatt
aaccccgaaatacccattcccgaagaagcaactgccgttcacaacattaccaatgaaatg
gtgaaagatgctcctactttcaaacaagttggggtggacttcgcttcattctgcagtgga
gaagtggtccttattgcgcataataatgatgcttttgacctcccattcatccgtagtgaa
tttgagcgtaatgaactcacactcccaaaatggccctacatcgattctctcaaattttcc
cgaaaataccgccctgatcttcctcgccactcgctccaacacctaagagagtatcatgga
tttcctgccaacaatgcccaccgcgcacttgatgatgtgatcgttctacatcaagtcttt
agcgaaatgatcgatgacttgacaatggatacaattttagagctcatgagtgaaaaacag
gtgctacgtcacatgccttttggcaaacatcggggcaaacctctcaaagaaatcccacca
gactatgtccgctggcttcatgaaaacggcgccctcgataagcctgataaccaagagctc
aaagacgccttttcaaaacttggaatgattcctaactag
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