Simkania negevensis: SNE_A09110
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Entry
SNE_A09110 CDS
T01559
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sng
Simkania negevensis
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A09110
Enzymes [BR:
sng01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SNE_A09110
DNA repair and recombination proteins [BR:
sng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SNE_A09110
Prokaryotic type
SNE_A09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CCB88788
UniProt:
F8L7Q0
LinkDB
All DBs
Position
gsn.131:complement(947380..948768)
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AA seq
462 aa
AA seq
DB search
MKTLFWFKQDLRLSDNQGLYEAAKIGSVLPIYILDPNHFSLGAASRVWLHHSLKSLSQSL
DGKLAVFQGAPLEVIRQLVKKYQIQAVYWNRGYEPWQISQEKEIKIQLDKEVKVQEWSSF
LLWEPWKILKADETPYKVFSPYYKRGCLFADPPRDPLGSPSKLDLIPVKHHGLDYLDLLP
KVRWDENVLQHWNIGEKSAWKKFQTFLAEGLLYYKTGRDFPAQNAVSRLSPHLHFGEISP
HQIWSVVNSQKQDHNTSSFLSELGWREFSYYLLYHFPTLPTQNFQSKFDYFPWKWESPYL
QHWCSGKTGFPIVDAGMRELWQTGYMHNRVRMIVASFLVKNLLIHWQIGLNWFENHLLDA
DLASNSASWQWVAGSGADAAPYFRIFNPITQGEKFDPHGEYTRRYVPELKKLPDKYLFCP
WDAPKSILEKAGVKLGRTYPEPIIDLKQSREEALQAFDQMKD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacttttttggttcaaacaagaccttcgcttatccgataaccaaggattatat
gaagcagccaaaattggtagtgtcttacctatctacattttagaccctaaccatttttcc
ctcggagcagcaagtcgtgtatggctgcatcattcattaaaatcattaagtcaatcactt
gatgggaagttggctgtttttcaaggtgctcctcttgaagtcattcgacaattggtcaaa
aaataccaaatccaagctgtttactggaatcgaggttatgaaccatggcaaatttcacaa
gaaaaagaaatcaaaatccagttagacaaagaagtcaaagtccaagaatggagcagcttt
ctactttgggaaccatggaaaattttgaaggccgacgaaaccccctataaagtatttagc
ccttactacaaaagagggtgtttattcgctgacccgccaagggaccccttaggatcaccc
tcaaaactagatttaataccagttaaacatcatgggttagactacttagacctcctccct
aaagttcgctgggatgaaaatgttttgcaacactggaacattggagaaaaatcagcttgg
aaaaagtttcagacgtttttagccgaaggactcttgtactacaaaacgggaagagacttt
cctgcacaaaatgcagtctcacgcctttcgcctcatcttcattttggggaaatttcccct
catcaaatctggtctgttgttaattctcaaaaacaagaccacaataccagctccttctta
agtgaacttggctggcgagaattttcttactacctcctctaccattttcccactttgcca
actcaaaacttccaatcaaaatttgactattttccctggaaatgggaaagcccatacctt
cagcattggtgtagtggaaaaacaggttttcctattgtcgacgcaggcatgcgtgaatta
tggcaaacaggttatatgcacaatcgtgttcgaatgattgttgcttctttccttgtaaaa
aaccttctcatccactggcaaataggcttaaactggtttgaaaatcaccttttagatgct
gatcttgcaagcaatagtgccagctggcaatgggtagcaggttcaggagcagatgctgct
ccctattttcgaattttcaaccccatcacacagggggaaaaatttgatcctcacggagaa
tacacccgtcgttacgttccagaactcaaaaaactccccgacaagtacctgttttgtcct
tgggatgcgccaaagagcattttggaaaaagctggggtgaagcttggaaggacatatccg
gaacccatcatcgatcttaaacaatcccgagaagaggctctccaagcttttgatcagatg
aaagattaa
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