Simkania negevensis: SNE_A10440
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Entry
SNE_A10440 CDS
T01559
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sng
Simkania negevensis
Pathway
sng00470
D-Amino acid metabolism
sng00550
Peptidoglycan biosynthesis
sng01100
Metabolic pathways
sng01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SNE_A10440 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SNE_A10440 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SNE_A10440 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sng01011
]
SNE_A10440 (ddl)
Enzymes [BR:
sng01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SNE_A10440 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sng01011
]
Precursor biosynthesis
Amino acid ligase
SNE_A10440 (ddl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
GARS_A
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
CCB88921
UniProt:
F8L819
LinkDB
All DBs
Position
gsn.131:1074545..1075654
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AA seq
369 aa
AA seq
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MAKKIRVGVLFGGQSTEHEISLQSARSVIQNMDPEKYDVVPIGIDKHGSWFFLTLEQFFI
PFKTEKLPSFQGKEGNLIPEGIQAKDMFFSPCVLRESLDVIFPALHGLYGEDGTVQGLVK
LANLPCVGSDVLGSALCMDKAIAKKLMRDAKLPIPAFLCLKLHDPINIPSIIQELGLPLF
VKPANSGSSVGINKVHTAEGILGAIEEAFQYDEKVILEEFIQGREIECSVLGNLDPIVSL
PGEIIPQHEFYSYEAKYLDENGAHFKLPAELEIETVQNIQKLAVQAFHLLECEDMARVDF
FLRKDGRIFLNELNTIPGFTTISLYPKLWEISGIPYPELIDRLITLALKRHKRKAALRTD
VNIVSCASN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatccgcgtaggcgttctttttggtggacaatcgaccgagcacgaaatt
tcacttcaatctgctcgcagcgtcatccaaaatatggatcctgaaaaatacgatgttgtt
ccgattgggatcgataaacatggaagttggttttttctcacgcttgagcagtttttcatt
cctttcaaaacggaaaaacttcctagttttcaagggaaggaggggaacctcattcctgaa
ggtattcaggcgaaagacatgttcttctctccctgcgttctaagagagtctcttgacgtc
atttttcctgctcttcatgggctatacggcgaagatggaacggttcaaggcctcgtgaag
ttggcaaacttaccttgcgttgggtcggatgtgttaggttcagcactttgcatggataag
gcgattgctaaaaaactcatgcgcgatgccaagcttcccattcctgcctttctgtgtctc
aaattgcatgaccctatcaatattccttcgatcatacaagaattagggctaccactcttt
gtcaaacctgcaaatagtggctcatctgttggaatcaataaagttcatacagcagaagga
attttaggtgcgattgaagaagcctttcaatatgatgaaaaagtcattctcgaagagttt
attcaggggcgggaaattgaatgctctgttttgggaaatctagatcccattgtttccctt
cctggggagatcattcctcagcatgaattttactcctatgaagcaaaatatttggatgaa
aacggtgcccatttcaaacttccagctgaactggagatagagactgttcaaaatattcaa
aaactagcagtgcaagcctttcatcttctcgaatgcgaagatatggcgcgagttgacttt
ttccttagaaaagacgggagaatctttttgaatgagctcaatactatcccagggtttacc
acaatcagtctttatcccaaactatgggaaatcagtggcattccatatcctgagctaatc
gatcgactcataacacttgcgcttaagcgacataagcgaaaagcagctttaagaacagat
gtgaatatcgtttcctgtgcttccaattaa
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