Simkania negevensis: SNE_A11600
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Entry
SNE_A11600 CDS
T01559
Symbol
ykfD
Name
(GenBank) putative oligopeptide transport ATP-binding protein YkfD
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
sng
Simkania negevensis
Pathway
sng01501
beta-Lactam resistance
sng02010
ABC transporters
sng02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SNE_A11600 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNE_A11600 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SNE_A11600 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sng02000
]
SNE_A11600 (ykfD)
Transporters [BR:
sng02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SNE_A11600 (ykfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
AAA_22
SMC_N
AAA_21
nSTAND3
AAA
AAA_5
NACHT
AAA_30
AAA_19
NB-ARC
MobB
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CCB89037
UniProt:
F8L8B4
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All DBs
Position
gsn.131:complement(1207784..1208737)
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AA seq
317 aa
AA seq
DB search
MSETPLIEIRNLVKTFRVKGQLLRAVDDVSLKIFPQETLGLVGESGCGKTALARVLMRLY
EATGGEILFEGKSFVKYSPRQIRELRQEMQYIFQDPYASLNPRMTAGEIIAEPLNIYRVG
TRAQREQRVRELLDLVGLRAESLSRFPHEFSGGQRQRIGIARALALNPRFIVCDEPIAAL
DVSIQAQIINLLKQLQEDMGLTYLFISHDLALVKYLSTRVAVMYLGKLMELAPSTELYET
PLHPYTQALLSAIPIPDPEVERKRSRIFLTGDVPSPINPPKGCVFCTRCPKAKPICHDKP
PEWKEVSPGHKVACHFL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactcccctcattgaaatccgaaatcttgtaaaaacttttcgtgtgaaagga
cagcttttacgggcagttgatgacgtttcccttaaaatcttcccgcaagaaactttaggt
cttgttggagaatcaggttgtgggaaaacggcacttgcccgcgttctcatgcgcctttat
gaagccacaggaggagaaatcctgtttgaaggaaagagtttcgtcaaatactctcctaga
cagatccgagaactgcggcaggaaatgcagtacatttttcaagatccttatgcttcactc
aatcctcgaatgacagctggagaaatcatcgctgaaccgctcaacatctaccgagtggga
acgcgcgctcagcgtgaacaacgagtaagagaacttcttgatctcgtcggtcttcgcgca
gaaagcctttctcgttttcctcatgaatttagtggtggacaacgtcaaagaattggcatt
gcccgcgcgcttgcgctgaatcctcgttttatcgtttgtgacgaacctattgctgctctt
gatgtctctattcaagcgcaaattatcaacttgctaaagcagcttcaagaagacatggga
ctgacctatcttttcatttcgcatgatttagctcttgtcaaatacctttcaactcgagta
gctgtgatgtatcttgggaaactcatggaacttgctccaagtactgagctctacgaaact
ccccttcatccctatacgcaggcacttctcagtgccatcccgattcccgatcctgaggtg
gagcggaaacgttctcgcatttttctcacaggagatgtacctagccctattaaccctcct
aaagggtgcgttttttgcacccgttgtccaaaagcaaagcctatttgtcacgataaacct
cctgagtggaaagaggtttcacctggccacaaagtcgcctgtcattttctttaa
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