Simkania negevensis: SNE_A14110
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Entry
SNE_A14110 CDS
T01559
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sng
Simkania negevensis
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sng03032
]
SNE_A14110 (gyrB)
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A14110 (gyrB)
Enzymes [BR:
sng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SNE_A14110 (gyrB)
DNA replication proteins [BR:
sng03032
]
Prokaryotic type
DNA Topoisomerases
SNE_A14110 (gyrB)
DNA repair and recombination proteins [BR:
sng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SNE_A14110 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
CCB89288
UniProt:
F8L8Y5
LinkDB
All DBs
Position
gsn.131:complement(1456578..1459070)
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AA seq
830 aa
AA seq
DB search
MTMTKEEETKQDYTASSITVLEGLQAVRERPGMYIGDTQVNGLHQLVYEVVDNCIDEAMA
GYCTQIQVTLHKDNSVTVEDDGRGIPVGIHEKESKKQGRDVSALEVVMTILHAGGKFDKS
TYKVSGGLHGVGVSCVNALSKHLHVDVYKDGKAYSMEFSRGKVSQDLKVEGDSNKRGTIV
HFVPDDQIFTVTEYDYGILLNRLRELAFLNKGITIFFRDERESEKEEVSFNYEGGISSFV
TYLNENKHALFDKPIYISGSKELHDGPIEFEVAMQWNHSYSESIYSYVNNIATRNGGTHV
TGFSAALTRSLNQYIRTNNLLKNLKVSVTGEDMREGLTTVLSIKIANPQFEGQTKQKLGN
SEVASVVQQIVGEEFSIFLGENPQIARTIVDKAILAAQAREAAKKARELTLRKTALDSGR
LPGKLSDCQETDPTKCEIYIVEGDSAGGSAKMGRDRRFQAILPIRGKILNVEKARLQKVL
QNEEVGTMISAFGCGIGNDNFNIEKLRYHRIIVMTDADVDGSHIRTLLLTFFYRHMPALI
ENNFVYIAQPPLYRVTRKKTSRYIHSEREMDEYLLNLGMSDVMLRLASHHEPLEKDEMKN
LLFSILEVEQLIGSIERKGIPFREFLAARNDQGMLPRFHVILNSQPLFVFSNDEFVRLRK
ENEELQRQKHEETLASIPVEEQTEEMKTFRSRPLSFVELYEEGRLHAIKTKLANYSFSID
QYAVAEGKLLDIIDEEGTETTAYTLKDVIEFLRKNGRKGIEIQRYKGLGEMNADQLWETT
MDPAKRTLIQVTIPDAVAADHMFTMLMGDEVAPRRAFIETHALSVKNLDI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaccaaagaagaagagactaaacaagactataccgccagttcgattacggta
ctagaaggtcttcaagcggtccgcgagcgccctgggatgtacattggggatactcaagtg
aatggtttacatcagctcgtttacgaagttgtcgataactgtatcgatgaagccatggct
ggttattgtacacaaatccaagtgacgcttcacaaagataactctgtcaccgttgaagat
gatgggcgtggaattcccgtaggaatccatgaaaaagaatcgaagaagcaaggacgtgat
gtttcagccttagaagttgtgatgactatccttcatgcaggtgggaagttcgacaaaagc
acatataaagtgtctggggggcttcacggagtgggtgtttcatgtgtgaacgccttatct
aagcacttgcacgtggatgtctataaagatggaaaagcctattcgatggagttttctcga
ggaaaagtttctcaagacctgaaagttgaaggagactccaacaagcgggggaccattgtt
cattttgttccagacgatcaaatctttactgtgacagaatatgactatggtatccttctc
aaccgtttaagagaactcgctttcttgaacaaaggaatcaccatttttttccgtgatgaa
cgagaatctgaaaaagaagaagtttctttcaattatgaaggaggaatttcttcgtttgtc
acctatctcaatgaaaataaacatgcactttttgataagccgatttatatcagcgggagc
aaagagctgcatgatggtcctattgagttcgaagtggcgatgcaatggaaccattcttac
tctgaatcgatctattcctatgtgaacaatattgcaacccgtaatggaggaacccacgtt
accggtttttccgcagcattgactcgctcactcaatcaatacattcgtacgaacaatctg
ctcaagaatttaaaagtttctgtcacaggggaagatatgcgggaaggactcacaacagtc
ctttcgatcaaaattgcaaaccctcaatttgaagggcaaacgaagcaaaaacttggaaac
agtgaagtagcttcagttgtacagcaaattgttggggaagagttttcgattttccttggt
gaaaatccccaaattgcccgcacaattgtcgataaggcgattttagcagcgcaagcacgt
gaagcggcgaaaaaagctcgtgaattaaccttgagaaaaacagcactagatagcggacgt
cttcctggtaaactcagtgattgccaagaaactgatccaacgaagtgtgaaatctatatc
gttgagggagactctgcgggtggttctgcgaaaatgggacgcgatcgtcgttttcaagcg
attcttcccattcgcggtaagattctaaacgttgaaaaagcccgccttcaaaaagtcttg
caaaacgaagaagttggaacgatgatttcggcatttggatgtggaattggaaatgacaat
ttcaacatcgaaaaattgcgttaccaccggatcattgtcatgacagatgctgacgtcgac
ggatctcacattcgcactctacttttaaccttcttctaccgacatatgccagcgcttatt
gaaaataacttcgtttatattgcgcaacctcctctttatcgggtaacgcggaagaagacc
agccgctatatccattctgagcgagaaatggatgaatatcttctcaatcttggaatgagc
gatgtgatgcttcgtttagcttcgcatcatgagcctcttgagaaagatgaaatgaagaac
ctcctcttttctattttagaagtggagcaattaatcggttcgattgagcgtaaagggatc
ccttttagagagtttttagctgctcgaaatgatcaagggatgctccctcgtttccacgtg
attctaaacagtcaacctctcttcgttttttcgaacgatgaatttgttagactgagaaag
gaaaacgaagaattgcagcgccaaaaacacgaagaaacattagcttcgatcccagtggaa
gaacaaacagaggaaatgaaaactttccgttcacggccgctctcttttgtagagctgtac
gaggaaggtagacttcatgcgatcaaaactaaacttgcaaattatagcttttccatcgat
caatacgctgtcgctgaaggtaagttgttagacattatcgacgaagagggaactgaaaca
accgcctacacactcaaagatgtgattgagttcctcagaaaaaatggacgcaagggaatc
gaaattcagcgttataagggtctcggtgaaatgaatgccgaccagctttgggaaactact
atggatccagcgaaacggaccttgattcaggtcaccattcctgatgcagtggctgcagac
cacatgtttactatgctaatgggagatgaagtcgcccctcgtcgcgcctttatcgaaaca
catgcattatctgtaaaaaatctagatatttaa
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