Simkania negevensis: SNE_A16740
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Entry
SNE_A16740 CDS
T01559
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein rfbH
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
sng
Simkania negevensis
Pathway
sng00541
Biosynthesis of various nucleotide sugars
sng01100
Metabolic pathways
sng01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SNE_A16740 (rfbH)
Enzymes [BR:
sng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
SNE_A16740 (rfbH)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
CCB89551
UniProt:
F8L9L4
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All DBs
Position
gsn.131:1750951..1752129
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AA seq
392 aa
AA seq
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MTYELSHNSWGKEELKAIQKVIDSDRLTMGVEVEKFEQAFASKMGSRYAVMTNSGSSANL
IAVAAFCFKKDRPLKAGDEVIVPAISWATTYFPLMQYGLKLRFVDVELDTLNMDVSQLEA
ALTPATRAVVGVSILGNPCALDILRAFCDKHDLLFFEDNCESMGATLHGKQCGTFGDIGT
FSCFFSHHISTIEGGVAVTDDLELYHLMLALRSHGWTRHLPDVSPIYEKNPDDFFEAYRF
IVPGYNVRPIEFFGAIGSEQLKKLDEFIAIRRKNAELWKDLFADDERFIIQKENGKSTHF
SFTLILHPNLSLPRQEVLDALKKHDIQFRIITGGNFLRHDVIKYCNYSCAHEIVNANIAH
DRGFFVGNHPRDLRAEIEKFHKILSEVTTACV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacgaactctcacataactcttggggaaaagaagaactgaaagccatacaaaag
gtgatcgactcggatcggctcaccatgggcgttgaggttgaaaaatttgagcaagccttt
gccagcaaaatgggaagccgctacgccgtcatgacaaactctggttcgtcagccaatctc
attgccgttgctgcgttttgcttcaaaaaagaccgccccttaaaagcgggcgatgaagtg
attgttccagctatttcttgggcaaccacttactttcccctcatgcaatacggacttaaa
ctccgctttgtcgatgttgaactcgatactctcaatatggatgtttctcagctcgaagcg
gccctaacccccgcaacacgagccgttgtcggagtcagtatcttgggtaacccttgtgct
ctcgatattctccgcgccttttgcgacaaacacgatcttctcttttttgaagataattgc
gaatccatgggagcgacccttcatggaaagcaatgcggcacctttggagacattggaacc
tttagctgttttttttcgcatcatatctcaactatcgaaggcggcgtcgccgtcacagat
gatctcgagctttaccatctcatgctcgctctccgttcacatggttggacacgccactta
cccgatgtttcccctatctatgaaaaaaatccagacgactttttcgaagcataccgtttc
atcgttcccggttacaatgtacgccccatcgaattttttggagcgattggctccgagcaa
ctcaaaaagctcgatgaattcatcgccattcgtcgtaaaaacgccgaactttggaaggac
ctttttgcagacgatgagaggttcatcattcaaaaagaaaacggaaagagtacccacttc
tcattcacattgattctccatcccaacctttcactgccccgccaagaagtcttagatgcc
ttaaaaaaacatgatatccagtttcggatcattacaggtgggaattttcttcgtcatgat
gtgatcaagtactgtaattatagctgcgcacatgagatcgtgaatgccaacatcgcacat
gaccggggattttttgtcggtaaccatccacgtgatcttcgcgctgaaattgaaaagttt
cacaagatcctatctgaagtcacaacagcgtgtgtttag
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