Simkania negevensis: SNE_A18450
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Entry
SNE_A18450 CDS
T01559
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sng
Simkania negevensis
Pathway
sng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE_A18450 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sng03019
]
SNE_A18450 (pcnB)
Enzymes [BR:
sng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SNE_A18450 (pcnB)
Messenger RNA biogenesis [BR:
sng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SNE_A18450 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
PRP38
Motif
Other DBs
NCBI-ProteinID:
CCB89722
UniProt:
F8L384
LinkDB
All DBs
Position
gsn.131:1922529..1923773
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AA seq
414 aa
AA seq
DB search
MKKPKTYSKKEHEIDVNLIDPKAIYILEKLRAAGYVAYLVGGGVRDLLLKKRPKDFDIST
SARPEEIKALFPSAILIGKRFRLAHVRFGRKVIEVSTFRAGDIENEQLITEDNIWGSPEQ
DVLRRDFTINGLFYDCATEEVIDYVGGYADIQKKYLRAIGQPYLRFKQDPVRMIRCLKFQ
ARYGFEVDEEARQALIDCKKDIVKSSQARVLEELLRMLESGSASSFFKLMTDHGLLQQLI
PTLAEFLEMPEGGEIYNYLQEADGTLKEPHRPQLQRPVLVACLVFPLLQKHLQTHFIDRE
KIPHLGDIYLEASDLIDSVFTTFFKLPRRLRISTIGLLVSQYRITPFTKRKKQIRIPRVA
GFDLALEFLNIRSRIEPALQETTLKWNDIYNKFAETNDLPDKTKRRRRRPRNKP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaccgaaaacctattcgaaaaaagagcatgagattgacgtcaatctcatcgac
ccaaaagcgatttatattctcgaaaagctgcgtgctgcaggctatgtcgcctaccttgtt
ggaggtggagtgagagatcttctgctcaaaaaaaggccaaaagattttgatatttcgact
tcggctagacctgaagaaattaaagctctttttccgagtgccattttgattggaaaacgg
tttcgcttagctcatgtccgattcggacgaaaagtgatcgaagtttcaacgttccgggca
ggagatatcgaaaatgagcaactcattaccgaagacaatatatggggaagccctgagcaa
gatgtgttgaggcgtgatttcacaatcaacggcctcttttatgactgtgcaacagaagaa
gttattgattacgtcggaggctatgcagacattcaaaaaaagtatctcagggctatcggt
caaccctatctccgctttaaacaagatccggtccggatgatccgctgcttaaaatttcaa
gcccgttatggatttgaggtagatgaagaagcgagacaagccctcatcgattgcaaaaaa
gatatcgtcaaaagctctcaagctcgggtattagaagaactcttaaggatgcttgaatcg
ggaagcgcaagctcttttttcaagcttatgactgaccatggcctacttcaacaactaatt
cctactttggccgagttcttagaaatgcctgaaggaggcgaaatatataattatctgcaa
gaagcagacggaacgcttaaggaacctcatagaccacaattacagcggcccgtactggtc
gcttgccttgtttttcctttgcttcaaaagcatctccaaacccattttatcgatcgggaa
aaaattccccaccttggagacatctacttggaagctagtgatttgatcgattcggtcttc
accacgttttttaaattaccgagacgtctacgtatcagcacaattggcctactcgtttct
caataccgcatcactcctttcacaaaacgaaaaaaacaaattcggattccacgcgtggca
gggtttgatttggctttggagtttctcaatatccgttcccggattgaaccagcccttcaa
gaaaccactcttaagtggaatgatatctataataaatttgccgaaaccaatgacctccca
gacaaaacaaaaagaaggcgacggcgtcctcgcaataaaccatga
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