Simkania negevensis: SNE_A20270
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Entry
SNE_A20270 CDS
T01559
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sng
Simkania negevensis
Pathway
sng00260
Glycine, serine and threonine metabolism
sng00460
Cyanoamino acid metabolism
sng00630
Glyoxylate and dicarboxylate metabolism
sng00670
One carbon pool by folate
sng00680
Methane metabolism
sng01100
Metabolic pathways
sng01110
Biosynthesis of secondary metabolites
sng01120
Microbial metabolism in diverse environments
sng01200
Carbon metabolism
sng01230
Biosynthesis of amino acids
sng01240
Biosynthesis of cofactors
sng04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SNE_A20270 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SNE_A20270 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SNE_A20270 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SNE_A20270 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SNE_A20270 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SNE_A20270 (glyA)
Enzymes [BR:
sng01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SNE_A20270 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CCB89904
UniProt:
F8L5N4
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All DBs
Position
gsn.131:complement(2114930..2116435)
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AA seq
501 aa
AA seq
DB search
MSYLNQYFEKTPESKRSSATIAYLAGLDHLRKDNPEIVQAIIKELHDQRSYLKMIASENY
CSLATQLAMGNLLTDKYSEGYPGHRFYAGCDNIDTIESLAIQELKKLYGCDHAYVQPHSG
ADANLVAFWGILVHRIQNKEVEALGKKSLDELSPEEYEKVRQLMLNQKVMGLSLSSGGHL
THGYRHNVSAKMFRAVSYDVNAETELIDFKQLEEQVKREKPAILIGGYSAYPRLINFAKM
REIAESVGAVFMVDMAHFSGLVAGKVMQGDYDPVLHAHIVTSTTHKTLRGPRGGMVLCKE
EYREVIDKGCPLVLGGPLPHVMAAKAVAFREAQTPEYRNYAEQIVKNSRALAERLLDRDV
KLFTGGTDNHLIVFDVMTSFGLTGRQAETAMREALMTVNRNAIPFDVNGPWYTSGVRIGT
AALTTLGMKEGEMHQIADLIADLLKASKAHIVDKTGKPSKAKVDIDSIVLKRVQEEVTTL
LGKFLLYPELTDLALAEQVLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatttaaatcaatactttgaaaaaactccggaaagcaaacgcagcagtgcgaca
attgcttatcttgccggacttgatcatttgcgaaaagataaccctgaaattgttcaggcg
attattaaagagctgcacgatcaacgtagttacttgaaaatgatcgcttcggaaaactat
tgctcccttgcaacccaacttgcaatgggaaatctcctcacggataagtacagtgagggg
tatccagggcaccgattttatgcagggtgcgataacattgacacgatcgaatctttagca
atacaagaacttaagaagttgtatggatgtgaccatgcttatgtccaacctcattcagga
gccgatgcgaatttggtggccttttggggaattctcgttcaccgcatccaaaataaggaa
gtcgaagccctaggaaaaaagtcattagatgagctttcccctgaagaatacgaaaaagtg
cgccaactcatgctgaatcaaaaggtcatggggctttcgctaagttcgggagggcatctt
actcatggttataggcataacgtttctgccaagatgttccgagcagtatcctacgatgtg
aatgctgaaactgagttgattgatttcaaacagctggaagagcaagttaaacgggaaaag
cccgccatcttgattgggggatattctgcatacccacgcctcattaattttgcaaaaatg
cgcgaaattgccgaatcagttggggctgttttcatggttgatatggcccatttctctggc
cttgttgctggtaaggtaatgcaaggggattatgatcctgttcttcatgctcacattgtg
acatcgacgacacataaaaccttacgcggccctcgtgggggaatggttctttgcaaagaa
gagtatcgtgaagtgattgataaagggtgccctcttgtgttaggtggcccgcttcctcac
gttatggcggctaaagctgttgcttttcgtgaagctcagacccctgagtacagaaattat
gcagagcaaattgtgaaaaactctcgagctttagctgaaaggttgctcgatcgagacgtg
aaactctttacagggggaacagacaatcacctcatcgttttcgatgtgatgacgagcttt
ggtttgacaggacgtcaagctgaaacagcgatgcgagaagctctcatgacggtcaatcgc
aatgcgattccatttgatgtgaatggtccttggtatacttcaggggttcgtattggaaca
gctgccttgaccacccttggcatgaaagaaggtgaaatgcatcagattgccgatttaatt
gccgatctgttaaaagcatcaaaagcccacattgtcgataagacaggaaaaccgagtaag
gcgaaggtggacattgattccatagtcttgaaacgggtacaagaggaagtgacaacgcta
ttgggcaagtttctcttgtatcctgaattgacagacttagccttagcagagcaagtgtta
acttaa
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